Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00329 ATGCCTCTACCAAGGTCGAGGGAGCCCGAAAACGCGACTCTTGGTCCTGCTGTCAGAGACGGTGAACATGTTTTTGGTGTGGCTTGCATCTTTGTATCATTTAATGACACCTTCATTCATGTGACTGATTTAGCTGGGAAGGAAACACTTGTCCGCATCGCTGGTGGAATGAAGGTTGAAGCTGACAGAGATGAGTCATCCCCACATGCTGCTACGCTTGCAGCACAAGATGTTGCTGCCAGATGCAAGGAGCTGGGCCTAACGGCTCTTCATATCAAGCTTCGTGCAACTAGAGGACACAAGCCGAAAACACCTGGCCCTGGTGCTCAGTCTGCTCTCCGTGCCTTGGCTCGGTCAGGAGTGAAAGCTGGTCGCGTATAG 381 0.5197 MPLPRSREPENATLGPAVRDGEHVFGVACIFVSFNDTFIHVTDLAGKETLVRIAGGMKVEADRDESSPHAATLAAQDVAARCKELGLTALHIKLRATRGHKPKTPGPGAQSALRALARSGVKAGRV* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00329 126 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 9 126 IPR001971 GO:0003735|GO:0005840|GO:0006412
Rops4g00329 126 Gene3D Ribosomal protein S11 4 126 IPR036967 GO:0003735|GO:0005840|GO:0006412
Rops4g00329 126 Pfam Ribosomal protein S11 26 126 IPR001971 GO:0003735|GO:0005840|GO:0006412
Rops4g00329 126 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 5 126 IPR001971 GO:0003735|GO:0005840|GO:0006412
Rops4g00329 126 MobiDBLite consensus disorder prediction 96 126 - -
Rops4g00329 126 FunFam 40S ribosomal protein S14 3 126 - -
Rops4g00329 126 SUPERFAMILY Translational machinery components 21 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00329 Rops-Chr4 9911606 9911986 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00329 1 126 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 75.781 8.63e-68 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00329 K02955 - gmx:100499665 204.527