Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00317 ATGAAGGACACTCACGTTGGCAAAGTTGCACCAATGAATGGTCCCACCCTGGCTGAACTAAAGGGTGGTCAGATAAACTTCATAAGCCGACCCCAGGTTGGGAGCACGTTCTCGTTTACTGCAGTCTTTGGAATGTTTAAGAAAAATTCGGTTAATGACATGAAGAAAGTAAATTTGGAAGATCTTCCTTCCAGTTTTAGAGGTCTGAAAGCCATAGTGGTTGATAGAAAACCGGTTAGAGTTGCTGTGACTAGATACCATTTGAAGAGACTAGGAATACTAGTTAAAGTTGCAAATAGCATCAGTAAAGCTGTGGCTTTATGTGGGAAAAATGGTTCTTTGACACCAGGAATGTTCCAGCCTGATATTATAATGGTTGAAAAAGACACATGGATATCTGGAGAGGATGGGGGTTTCACTGTATGGAAACTGGACTTGAAACAAAATAGACATATGTCTAAGATGCTCAAGATGATCCTTCTAGCAACCAATATTAATAACACTGAATTTGATAGTGCTAAAATGCGGGTTTCTTGA 537 0.3985 MKDTHVGKVAPMNGPTLAELKGGQINFISRPQVGSTFSFTAVFGMFKKNSVNDMKKVNLEDLPSSFRGLKAIVVDRKPVRVAVTRYHLKRLGILVKVANSISKAVALCGKNGSLTPGMFQPDIIMVEKDTWISGEDGGFTVWKLDLKQNRHMSKMLKMILLATNINNTEFDSAKMRVS* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00317 178 PANTHER TWO-COMPONENT HISTIDINE KINASE 17 167 - -
Rops4g00317 178 ProSiteProfiles Response regulatory domain profile. 70 178 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00317 Rops-Chr4 9553182 9553718 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00317 16 174 Histidine Kinase Gene Family AT2G01830 55.488 5.32e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00317 K14489 - gmx:100813204 238.424