Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00315 ATGAAGGACACTCACGTTGGCAAAGTTGCACCAATGAATGGTCCCACCCTGGCTGAACTAAAGGGTGGTCAGATAAACTTCATAAGCCGACCCCAGGTTGGGAGCACGTTCTCGTTTACTGCAGTCTTTGGAATGTTTAAGAAAAATTCGGTTAATGACATGAAGAAAGTAAATTTGGAAGATCTTCCTTCCAGTTTTAGAGGTCTGAAAGCCATAGTGGTTGATAGAAAACCGGTTAGAGTTGCTGTGACTAGATACCATTTGAAGAGACTAGGAATACTAGTTAAAGTTGCAAATAGCATCAGTAAAGCTGTGGCTTTATGTGGGAAAAATGGTTCTTTGACACCAGGAATGTTCCAGCCTGATATTATAATGGTTGAAAAAGACACATGGATATCTGGAGAGGATGGGGGTTTCACTGTATGGAAACTGGACTTGAAACAAAATAGACATATGTCTAAGATGCTCAAGATGATCCTTCTAGCAACCAATATTAATAACACTGAATTTGATAGTGCTAAAGCTGCAGGTTTTACTGACACCGTGATCATGAAGCCTTTGAGAGCTAGCATGGTGGCTGCTTGTCTTCAACAAGTTCTAGGGATGGGGAAAAAGAGACAGTTAGGAAAAGGCATGCCTAGTGGTTCTGCTTTTCTACAAAGCCTTCTTTATGGAAAGAAAATCTTGGTGGTTGACGACAATGGGGTAAACCGGAGGGTTCTTTGCAGTGCATTGAAAAAGTTTGGAGCTGATGTGAAGTGTGCTGAAAGTGGCAAAACTGCACTTGAAATGCTTCAATTGCCTCACAATTTTGATGCTTGCTTCATGGACATTCAAATGCCCGAAATGGATGGATTTGAAGCAACAAGTCGAATTCGGATGATGGAGAGAAAAGCAAAGTTGCACCAATGA 912 0.4134 MKDTHVGKVAPMNGPTLAELKGGQINFISRPQVGSTFSFTAVFGMFKKNSVNDMKKVNLEDLPSSFRGLKAIVVDRKPVRVAVTRYHLKRLGILVKVANSISKAVALCGKNGSLTPGMFQPDIIMVEKDTWISGEDGGFTVWKLDLKQNRHMSKMLKMILLATNINNTEFDSAKAAGFTDTVIMKPLRASMVAACLQQVLGMGKKRQLGKGMPSGSAFLQSLLYGKKILVVDDNGVNRRVLCSALKKFGADVKCAESGKTALEMLQLPHNFDACFMDIQMPEMDGFEATSRIRMMERKAKLHQ* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00315 303 CDD REC_hyHK_CKI1_RcsC-like 228 300 - -
Rops4g00315 303 ProSiteProfiles Response regulatory domain profile. 70 200 IPR001789 GO:0000160
Rops4g00315 303 Pfam Response regulator receiver domain 228 296 IPR001789 GO:0000160
Rops4g00315 303 SUPERFAMILY CheY-like 225 295 IPR011006 -
Rops4g00315 303 Gene3D - 64 204 - -
Rops4g00315 303 SUPERFAMILY CheY-like 66 201 IPR011006 -
Rops4g00315 303 Gene3D - 217 302 - -
Rops4g00315 303 SMART REC_2 226 301 IPR001789 GO:0000160
Rops4g00315 303 ProSiteProfiles Response regulatory domain profile. 227 303 IPR001789 GO:0000160
Rops4g00315 303 PANTHER TWO-COMPONENT HISTIDINE KINASE 17 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00315 Rops-Chr4 9534630 9535541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00315 17 300 Histidine Kinase Gene Family AT2G01830 62.199 7.86e-109 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops4g00315 Response_reg 7.1e-15 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00315 K14489 - gmx:100813204 455.677