Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00305 ATGAGATCCTCTTTCTCTCCATCCAGTTTCCCACTTCCCCATCTTCTACCCCAAACCAGAAGCAAAATAGCCATTGGTGATTCTCTTATAGCAAAAACCAACACCACCCCATGGTTGGTTTCACCTTCTGGTGACTTTGCCTTTGGTTTTCTCCAACCTAATGGCACTGAACTTTTCTTGCTTTCCATTTGGTATGCCAAGATTCCAGAAAAGACCATGGTTTGGTATGCCAATGGAGACAATCCTGCACCAAAGGACTCAAAAGTGGAGCTAAGTGCTAGTGATGGGCTAGTCCTAACTGCTCCAAACGGTGTCCAGTTATGGAAAACTGAGGGCCTCACTGGTGGAGTTTCTCATGGTGTGTTCAATGACACCGGCAACTTTGTGCTTGAAGATGGTAGCTCCAACAGTGTCTGGGAGACTTTCAAGCATCCCAGGGACACCTTGTTGCCCTCTCAGGTTCTTGAAAAGGGTGAAAAACTTTCTTCAAGACTTAGGGAGAATAATTTCAACAAGGGAAGGTTTGAGCTCTTTTTTCAAAATGATGGTAATCTTGTGATGTATTCTATAAATTTGCCATCTGGATATGTTAATGAAGCAAACTATTATGAAAGTGGAACTGTGGAATCCAACACATCAAGTGCTGGAACAAAACTGGTCTTTGATAGATCAGGGGACTTGTATGTTTTGAGAGAGAACAATGTAAAGTCCAATATTTCAGATGTGAGTAGTGTCTCTACTTCTCAGTTTTATCTTAGAGCAACACTTGATTTTGATGGGGTGTTCACACTCTATCAGCATCCAAAGGGTTCAAATCGCAATGGAGGTTGGACCACAGTGTGGTCTCAACCAGATAATATATGCAGTTATGTTATTAGTACAGGTAGTGGCATTTGTGGATATAACAGCTACTGCACCTTGGGAGATGATAAGAGGCCAAAATGCCAATGCCCAAAAAAGTACTCTCTTCTTGATCCTAATGATCCTTATGGTAGTTGCAAGCCAGATTTCATACAAGGATGTGCGGAAGATGAACTTAGTAACAGGAAAGATCTTTATGATTTTGAGATTTTGATAAATACTGATTGGCCTCTTTCAGATTCTGTGCTTCAAAAGCCTTTTACAGAAGATCAATGTAGACAGTCTTGTATGGAAGATTGCCTGTGTTCTGTGGCTATTTTCAGGTTAGGTGACCACTGCTGGAAGAAAAAACTGCCACTTTCAAATGGGAAAGTTGATGCCACACTTAATGGTGCTAAGGCCTTCTTGAAAGTGAGGAAAGATAATTCCTCCTTTGTTGTTCCTCCAAATCCAATCATTGTGAACAAGAATAGGAACACTTTGATTTTGGTTGGTTCTGTGCTTTTGGGTAGCTCTGCTTTTCTCAATCTTGTATTGATTGGAGCAATATGCTTCAGCACGTCCCTCATTTTTCAGTACAAAAAGAAGCCTGGAAGAGTCAGCAGAAGTAACACTACTGTTGCAACCAATTTGCGTTGCTTCACTTATGAGGAACTTGAAGAAGCTACCAATGAATTTGACAAAGAGCTAGGAAGGGGAGCTTTTGGTATTGTTTATGAAGGAGTCATCAACATAGGTTCCACAACTCGTGTGGCTGTGAAAAAGTTGAACACTTTTCTCTTGGAAGAGGTTCACAAGGAATTCAAGAATGAATTGAATGTCATTGGTCTCACACATCACAAGAACTTGGTTCGTTTACTTGGATTTTGTGAGGCTGGATCTGAAAGGTTGCTAGTTTATGAGTACATGAGCAATGGCACTTTAGCGAGTCTTCTTTTCAATGGGGAGAGACCCAGTTGGAAACTAAGACTACAAATTGCAATTGGGATTGCTAGAGGACTTGTTTATTTACATGAAGAGTGTAGCACCCGAATCATCCACTGTGACATAAAGCCTCAAAACATACTCCTTGATGATCACTTTAATGCAAGGATTTCTGACTTTGGATTGGCCAAACTCTTGAACATGAATCAGAGCAGAACACATACTGCCATAAGGGGAACAAAAGGAAGAGCTGTTGAAGTGGAGCCAGAAGATGAAGAGAGAGCAATACTAACTGATTGGGCTTATGACTGCTACAAAGAAGGTAGTCTTGGTGCTTTGGTTCAGGGTGACAAGGAGGCATTGGAGGACAAGAAGAACTTGGAGAAGTTGGTAATGATTGCCATTTGGTGTGTTCAAGAGGATCCAGGTCTTAGACCCTTCATGAGAAATGTGACTCAGATGCTTGAAGGTATTGTTGAAGTGCCAGTTCCACCATGCCCCTCCCCAATTAGTATTCAGTATTCTCTAGATTAA 2319 0.4135 MRSSFSPSSFPLPHLLPQTRSKIAIGDSLIAKTNTTPWLVSPSGDFAFGFLQPNGTELFLLSIWYAKIPEKTMVWYANGDNPAPKDSKVELSASDGLVLTAPNGVQLWKTEGLTGGVSHGVFNDTGNFVLEDGSSNSVWETFKHPRDTLLPSQVLEKGEKLSSRLRENNFNKGRFELFFQNDGNLVMYSINLPSGYVNEANYYESGTVESNTSSAGTKLVFDRSGDLYVLRENNVKSNISDVSSVSTSQFYLRATLDFDGVFTLYQHPKGSNRNGGWTTVWSQPDNICSYVISTGSGICGYNSYCTLGDDKRPKCQCPKKYSLLDPNDPYGSCKPDFIQGCAEDELSNRKDLYDFEILINTDWPLSDSVLQKPFTEDQCRQSCMEDCLCSVAIFRLGDHCWKKKLPLSNGKVDATLNGAKAFLKVRKDNSSFVVPPNPIIVNKNRNTLILVGSVLLGSSAFLNLVLIGAICFSTSLIFQYKKKPGRVSRSNTTVATNLRCFTYEELEEATNEFDKELGRGAFGIVYEGVINIGSTTRVAVKKLNTFLLEEVHKEFKNELNVIGLTHHKNLVRLLGFCEAGSERLLVYEYMSNGTLASLLFNGERPSWKLRLQIAIGIARGLVYLHEECSTRIIHCDIKPQNILLDDHFNARISDFGLAKLLNMNQSRTHTAIRGTKGRAVEVEPEDEERAILTDWAYDCYKEGSLGALVQGDKEALEDKKNLEKLVMIAIWCVQEDPGLRPFMRNVTQMLEGIVEVPVPPCPSPISIQYSLD* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00305 772 CDD B_lectin 39 145 IPR001480 -
Rops4g00305 772 FunFam Serine/threonine-protein kinase 146 291 - -
Rops4g00305 772 SUPERFAMILY Protein kinase-like (PK-like) 492 751 IPR011009 -
Rops4g00305 772 Pfam Protein kinase domain 513 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00305 772 ProSiteProfiles Protein kinase domain profile. 511 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00305 772 Pfam D-mannose binding lectin 72 156 IPR001480 -
Rops4g00305 772 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 207 IPR036426 -
Rops4g00305 772 Gene3D Transferase(Phosphotransferase) domain 1 679 760 - -
Rops4g00305 772 SMART blect_4 28 145 IPR001480 -
Rops4g00305 772 FunFam Os07g0541700 protein 590 675 - -
Rops4g00305 772 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 678 763 - -
Rops4g00305 772 FunFam S-receptor-like serine/threonine-protein kinase 481 589 - -
Rops4g00305 772 Gene3D Phosphorylase Kinase; domain 1 485 589 - -
Rops4g00305 772 ProSitePatterns Protein kinases ATP-binding region signature. 517 542 IPR017441 GO:0005524
Rops4g00305 772 Gene3D - 20 144 IPR036426 -
Rops4g00305 772 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 17 143 - -
Rops4g00305 772 ProSiteProfiles Bulb-type lectin domain profile. 26 143 IPR001480 -
Rops4g00305 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Rops4g00305 772 Gene3D - 145 273 IPR036426 -
Rops4g00305 772 PIRSF SRK 5 685 IPR024171 GO:0004674
Rops4g00305 772 PIRSF SRK 678 771 IPR024171 GO:0004674
Rops4g00305 772 SMART serkin_6 511 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00305 772 Gene3D Transferase(Phosphotransferase) domain 1 590 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00305 Rops-Chr4 9204928 9207824 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00305 497 752 Receptor kinase-like Gene Family AT1G60800 39.796 2.37e-58 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops4g00305 Pkinase 1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00305 - - gmx:100815462 1145.95