Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00290 ATGGATAATATGGGGCAATTATGCTTCTCCAATGATGTATGGTTAGAATGCCTTTACTGTCACTGTTGTTTTGAGGCATGGTATAATCGACATAAGCTGAATCCTAATATCCTATATAGTGGCCTTGTTGGAGGCCTTGAAAAAAATGGTGACTTTTCTTATGACAGATCCAATTATGAGCAAACTGAGCCTACAATTTTAGGTTTTGCCCCTCTTGTAGGCATCTTTGTTGAACTGCATAGTTTATATAGTAATACAGAATTAATTCTCTTCATTATTCATAGAATCTGGAAAGCAGAAATTTCATCCACTAATGGCTCAACATCCATCAACCAAGAGCCACTTTCTGATGATTCTAGAAAAGTAATGTCTGCTGCCAAGCTTGCTGAGCTTGCCAAAGCTGATCCCAAGCGTGCTAGAAGGATATGGGCTAATAGACAGTCTGCTAGAAGTATACATGACCTGGCTGCTCAGAACAATGAGTTGAGGTTGCAGTTGCAAGTCATGCATCAACAAGTTCAATTGCAAACTGCATTGAACAATGCAATGAGAGAGGAAGTTGAGCATTTGAGAATTCTGACTGGGCAAGTGCTAAATGGACCTAGGAAGCCTGCTTCACTTCGAGGGGGACAACAAAACAATTCCAACAATCAGGCCATGGAACCTCATTTAGCTGCACAACAACTTTAA 690 0.4029 MDNMGQLCFSNDVWLECLYCHCCFEAWYNRHKLNPNILYSGLVGGLEKNGDFSYDRSNYEQTEPTILGFAPLVGIFVELHSLYSNTELILFIIHRIWKAEISSTNGSTSINQEPLSDDSRKVMSAAKLAELAKADPKRARRIWANRQSARSIHDLAAQNNELRLQLQVMHQQVQLQTALNNAMREEVEHLRILTGQVLNGPRKPASLRGGQQNNSNNQAMEPHLAAQQL* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00290 229 MobiDBLite consensus disorder prediction 206 229 - -
Rops4g00290 229 MobiDBLite consensus disorder prediction 199 229 - -
Rops4g00290 229 Coils Coil 152 172 - -
Rops4g00290 229 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 105 150 - -
Rops4g00290 229 Gene3D - 16 92 IPR012341 GO:0005975
Rops4g00290 229 SUPERFAMILY Six-hairpin glycosidases 19 94 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00290 Rops-Chr4 8789293 8790712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00290 95 229 bZIP Transcription Factor Family AT2G31370 40.217 2.85e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00290 - - pop:18106892 108.997