Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00284 ATGAACGACAGCGACAACAGCCAAAACGACGCCATACCATCACTAGATTTTGAAAACCTGAAAATCATTTCCGCCGTGGGGCGCGGCGCCAAGGGTGTCGTTTTCCTGGCGAGAACCGGTGACCGGAATGAGTGTGTGGCTCTGAAAGTTATCTCCAAAGATTTGATTCTTCAGAAGAAGGCGAAGTACGATAACAAAAACGACAACGATGAAGGTTCTGGCGAGTATAAGAGGGTGTCGTTTGAACAGCAAGTGCTACGTCGTTTTGATCACCCGCTTTTGCCACGGTTGCGAGGGGTTTTTGAAACTGAGAAAATCGTTGGGTTCGCCATTGATTATTGCCACGGTGGTAACCTCCATTCTCTTAGGAAGAAACAAACTGAGCAAATGTTCTCTGATGATACCATCAGGTTTTACGCTGCTGAATTGGTTCTTGCTTTGGAGTATTTGCACGATTTGGGAATAGTGTATAGAGATTTGAAACCAGAGAACGTGATGATCCAAGAAAATGGTCACATAATGCTAGTTGATTTTGATCTCTCCAGGAAGCTAAACCCTAAATCGCCCAACTCACTGAGTCGCAACTCGTCGGCGACTTCTAACTCGTCAACGGGGAAACCCATGAGAAGGCGACGATTCTCACGGTTGTACAGTTACCGTAACTCGGGCATCTCGCCGTGTGACTCGGACTCGAATCCCCAACCCGAAGTCAACTCAGCGCGACGGAACGAGTCAGACTCGGTTGAGAAATCTAACTCGTTCGTTGGAACAGAAGAGTACGTGGCACCTGAAATTGTAATGGGAAAGGGTCACGGTTTCAGCGTTGATTGGTGGTCACTCGGTGTCGTTTTGTACGAGATGTTGTACGGTACGACGCCGTTTAAGGGGACGAATCGGAAAGAAACGTTTTATCGGATTTTGACTAAGGAACCGGAGTTGACAGGGGAGAAAACGGCGTTAAGAGATTTGATTAAGAGATTGTTGGAAAAAGATCCTGACCGTAGGATTAAAGTGGATGAAATCAAGGGCCATGATTTCTTCAAAGGTGTTAAGTGGGACACTGTGTTGGAAATAGCAAGACCACCTTATATTCCTCAAGTTGAGGTTGAGAAGAACAAAGTGGGGTTTAGCAAAAACGAGGTGGAGTTGTTTGTGCATGAGGTGTTTTTTCCTAGTTGTGATGATGATGGAGAGAAAATTAATAAAGTGGAGGAAAAGAAGGGTAATGGTGAAAACAATAAAATGGTGAGGGTTGACAAGTTTGGTCAGAGTCCCACTGAGAATGAAGATTTTTTAATTTTTTGA 1305 0.4498 MNDSDNSQNDAIPSLDFENLKIISAVGRGAKGVVFLARTGDRNECVALKVISKDLILQKKAKYDNKNDNDEGSGEYKRVSFEQQVLRRFDHPLLPRLRGVFETEKIVGFAIDYCHGGNLHSLRKKQTEQMFSDDTIRFYAAELVLALEYLHDLGIVYRDLKPENVMIQENGHIMLVDFDLSRKLNPKSPNSLSRNSSATSNSSTGKPMRRRRFSRLYSYRNSGISPCDSDSNPQPEVNSARRNESDSVEKSNSFVGTEEYVAPEIVMGKGHGFSVDWWSLGVVLYEMLYGTTPFKGTNRKETFYRILTKEPELTGEKTALRDLIKRLLEKDPDRRIKVDEIKGHDFFKGVKWDTVLEIARPPYIPQVEVEKNKVGFSKNEVELFVHEVFFPSCDDDGEKINKVEEKKGNGENNKMVRVDKFGQSPTENEDFLIF* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00284 434 Gene3D Transferase(Phosphotransferase) domain 1 118 187 - -
Rops4g00284 434 Gene3D Transferase(Phosphotransferase) domain 1 242 366 - -
Rops4g00284 434 SMART serkin_6 20 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00284 434 MobiDBLite consensus disorder prediction 221 241 - -
Rops4g00284 434 PANTHER FLIPPASE KINASE 1-RELATED 14 372 - -
Rops4g00284 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Rops4g00284 434 Gene3D Phosphorylase Kinase; domain 1 20 117 - -
Rops4g00284 434 MobiDBLite consensus disorder prediction 187 207 - -
Rops4g00284 434 FunFam Serine/threonine-protein kinase OXI1 249 366 - -
Rops4g00284 434 ProSiteProfiles AGC-kinase C-terminal domain profile. 348 434 IPR000961 GO:0004674|GO:0005524|GO:0006468
Rops4g00284 434 FunFam Serine/threonine-protein kinase OXI1 118 186 - -
Rops4g00284 434 Pfam Protein kinase domain 22 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00284 434 Pfam Protein kinase domain 249 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00284 434 ProSiteProfiles Protein kinase domain profile. 20 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00284 434 MobiDBLite consensus disorder prediction 221 253 - -
Rops4g00284 434 MobiDBLite consensus disorder prediction 187 208 - -
Rops4g00284 434 SUPERFAMILY Protein kinase-like (PK-like) 18 372 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00284 Rops-Chr4 8590527 8592704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00284 12 400 AGC Kinase Gene Family AT4G13000 59.231 5.65e-154 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops4g00284 Pkinase 3.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00284 K20714 - gmx:100785773 581.252