Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00281 ATGAGGTACTTAAGGGTTCTATCTTTGTCACGCTATGACAATATCACTAAGTTGCCTGATTCTCTTGGAAATCTCATTCATTTACGATATTTGGATCTCTCTTACACTAAAATCAAAAGGTTGCCTGATGGGGCGTGTAAGCTTTATAATTTGCAGACCTTGCTGTTATCACACTGTGAATCTCTAATTGAATTGCCTCGAGACATAGACAAACTGGTTAACCTGCGCCATATTGATCTTGTTGGAACTAAGCTGAAGGAGATGCCCACAAATGTGAGCAGGCTAAAGAATCTCAAAACTATGACCTCCTTTGTTGTTAGCAAAAGGGAGGATGGATTGAAGGTCAAAGATCTTGGAAATTTTCTACATCTACAAGGAAAACTCTCCATCTTAAACCTGCACCATGTTGCCGATGCCAATGAAGCTTTCCAAGCAAATTTGAAAAACAAAGAACAAATTAGGGAGTTAGCATTGGAATGGTGCCGCATCACTAAAACCAAAACCACACCTATTGATGAGAGAGAAGTACTTGACCAGCTTCAACCATCAACAAACCTGAAGAAACTCAGCATCAAATATTATGGAGGCACCACCTTTCCAAATTGGTTGGGTTATTCTTCCTTTTGCAATATGGTATACCTTTGGATAAGCGATTGCAATCATTGTTGGTCACTTCCACCACTCGGGCAATTACCTTCTCTGAAGCAACTCAGCATTGCTAGGCTCAAATCACTCAAGTGTATTGGAGTTGAGTTCTATGGTAAATGTGGTTCCTCTTCATTTCAGCCTTTTCCATCTCTGGGGTATCTAAGCTTTATAGGACTGTCACAATGGGAGGAGTGGCATTCCCTCAAAGAAATAGCTACTGAATTTCCTACCCTTCAATATCTCGGCATATGTGACTGTCCCAAACTAAGAGGAAACTTACCAAACAATCTTCCTTCGTTATATACACTCACGATAGATGGATGCAATGTACTTGAGTTACAAAACTCAAATCCTTTGAAAAGATCATCAGATCTCAAGTGGATCTCTTCTCTTCAATCTTTGCATGTTATTCACTCACCAGGTGTATTGTCATTACTAGAAACAGGGACATTACCTTTGCTCGACTACTTCTATGTTGGATACTATGATTCTCTAAAGCTGTTTCCTAGGATGATAATTGGCAGCAATTGCCTTCGGACTCTGTATATCAGTAGCATTCCATCTCTTGTGTCCTTTCAACAACAAGGTCTGCCCTTTTCTTTGATACACCTTCGTATCCAAAATTGTGACAAATTAGAATTTCTGCATATTGAAACCATGCAGAATTATTCATCGCTCGTGCATCTGACATTAAGTGACAGTTGTCATTCACTGGAATCATTTCCATTAGGCAATTTCCCTGTTTTGGAGCGTCTTTATATCGAGAAATGCCCAAATCTCAAATCTTTCTCGATCTCAGATAGCTCAGCTAAGAGCCTCTCGCATTTTAAAGCCTTCCATGTAACCAGTTGTCCTAACTTACACTCCTTTCCACACTTGCACACTCCCAATTTGGAGAAATTTTGTGTTAAAAAGTGTGACAAACTCGTGTCTCTGCCAGAACGGATTAACACACTCACTGCCCTACAAGTATTGAATGTCCATGAGCTTCCATTACTTGAGTCATTTGCAGAAGAGGGATTGCCTTTTAATTTGCGAAGACTCGAGGTCATCGATTGTGGGAAACTCTCAACAACGTCCATTGTTCTGTGGCGTTCACAATGGCTCTATTCTCTTACGGAATTAACCATTGGAGGTGATGATCTTGTTGATGCCTTGATGAAGAAGCTACTGCTTCCAACTTCTCTTGTGTCCCTATGCATCCAAGATGTTTCTTTCTTAGACGGAAAAGGGATTCAGCATCTTACTTCTCTGGAAAATCTGAAAATTATGAAATGCCCAAACCTTGAGGTGTTGCCAGAAAAGGAGTTGCTTCCACTTTCACTTTCAGTCCTCAGTATCAAAGACTGTCCTTTGTTACAAGATGCCTATCGATGCAACGAAGGAATATATTGGCACAAGATTGCCCACATTCCTTGCATAAAGATGAATAAAGAAGTAATAATATGA 2097 0.4006 MRYLRVLSLSRYDNITKLPDSLGNLIHLRYLDLSYTKIKRLPDGACKLYNLQTLLLSHCESLIELPRDIDKLVNLRHIDLVGTKLKEMPTNVSRLKNLKTMTSFVVSKREDGLKVKDLGNFLHLQGKLSILNLHHVADANEAFQANLKNKEQIRELALEWCRITKTKTTPIDEREVLDQLQPSTNLKKLSIKYYGGTTFPNWLGYSSFCNMVYLWISDCNHCWSLPPLGQLPSLKQLSIARLKSLKCIGVEFYGKCGSSSFQPFPSLGYLSFIGLSQWEEWHSLKEIATEFPTLQYLGICDCPKLRGNLPNNLPSLYTLTIDGCNVLELQNSNPLKRSSDLKWISSLQSLHVIHSPGVLSLLETGTLPLLDYFYVGYYDSLKLFPRMIIGSNCLRTLYISSIPSLVSFQQQGLPFSLIHLRIQNCDKLEFLHIETMQNYSSLVHLTLSDSCHSLESFPLGNFPVLERLYIEKCPNLKSFSISDSSAKSLSHFKAFHVTSCPNLHSFPHLHTPNLEKFCVKKCDKLVSLPERINTLTALQVLNVHELPLLESFAEEGLPFNLRRLEVIDCGKLSTTSIVLWRSQWLYSLTELTIGGDDLVDALMKKLLLPTSLVSLCIQDVSFLDGKGIQHLTSLENLKIMKCPNLEVLPEKELLPLSLSVLSIKDCPLLQDAYRCNEGIYWHKIAHIPCIKMNKEVII* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00281 698 SMART LRR_typ_2 25 48 IPR003591 -
Rops4g00281 698 SMART LRR_typ_2 72 95 IPR003591 -
Rops4g00281 698 SUPERFAMILY L domain-like 334 672 - -
Rops4g00281 698 Gene3D Ribonuclease Inhibitor 359 554 IPR032675 -
Rops4g00281 698 Gene3D Ribonuclease Inhibitor 1 354 IPR032675 -
Rops4g00281 698 SUPERFAMILY L domain-like 2 354 - -
Rops4g00281 698 Gene3D Ribonuclease Inhibitor 555 679 IPR032675 -
Rops4g00281 698 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 391 671 - -
Rops4g00281 698 Pfam Leucine rich repeat 27 85 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00281 Rops-Chr4 8551837 8553933 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00281 15 109 WRKY Transcription Factor Family AT4G12020 39.583 2.52e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00281 - - aprc:113850186 912.138