Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00273 ATGTCAGCATGTTCTGCCAGTATTTTACGACCTTACCCCATCATATCAACGCATTTGAACAAAGGAAACAGACAAATATGGAAGGCAGCACTGGTGGAAGCTGCAAATGTGTTTGGTTGGGAAGTGAGAAATTTCAGTAATGAAAGCACTGTTGTAAAGCAAATTGTAAGGACTGTTTTTGAAAAACTAGATAGAAATTACTTATCTATCACAGACTTTCCAGTTGGATTAGAATCTCGTGTGGAACAGGTGATTCGATTTTTAAGAAATAAAGCAAGTGGAGTTCGTATAGTAGGGATTTGGGGAATGGGAGGCGTTGGTAAAAGCACCATAGCCAAAGTCATCTACAATAAACTTCATCATGAATTTGAAGATCAAAGTTTCCTTGCAAATATTAGAGAAGCTTGGGAGAAAGATAGGGGTCAAATTGATTTACAAGAACAACTTCTTTCGGATATCCTTAAAATTAGAAAGATAAAGGTGCATAGCATTGAGTGGGGGAAAGCTATGATCAAGGAAAGACTCTGCATAAAAAGGGCACTTCTTGTACTTGATGATGTGAATAATTTTGAGCAATTAAATGCACTATGTGGAAAACGAGATGCGATTGGTCCAGGAAGTATAATCATCATTACAACAAGAGATTTACAGTTTCTCGATGTCCTCGAAGTTGACTATGTCTATGAAGTGGAGGAATTGAATGAAAAAAAGAGCCTGATAAAAGTAGAAAGGAATAACAAACTTGGAATGCATGATTTGTTACGAGATATGGGAAGAGAGATTGTTCGCAAAAGATCAACAAAGGAACCTGAAAAGCGGAGTCGACTATGGTTTCATGACGATGTACTTGATGTATTGACAAAAAATACTGGAACAAATGCTACTGAGGGATTAACCTTGAAGTTGCAAGGAACCAGTAGATACTGCTTCAATACTAATGCTTTGAAGGAAATGAAGAGATTGAGACTGTTGCAACTTGATTATATAAAACTCAACGGAGATTATGGGTATCTTTCTAAGCAACTAAGATGGATCTGTTGGCGAGGATTTCCTTTAAGATACATACCTGACAAATTTTATCAAGGAAATGCAGTTGCAATTGACTTAAAACATAGTAATCTTAAAGTAGTCTGGAAGGAACCACAGTTGTTGGAGTGTTTGAAAATCCTCAATGTTAGTCATTCCAAGTACTTGACAAACACCCCAGACTTTTCAAAACTACCAAAACTTGAAGAGCTCATTATGAAAGATTGTCCAAATTTATGCAAGATACATCAATCCATTGGAGATCTCCACAATATTCTTCTGATAAATTTGGAGGACTGTACCAGTCTTAACAATCTCCCCAGGGTGACATATAAGTTGAAATCTTTGAAAACTCTCATCCTTTCTGGTTGTTCAAAGATTGACAAATTGGAAGAAGATATAGTGCAGATGGAATCCTTGACAACTCTAGATGCAAAGAATACTGCTGTGAAACAAGTGCCTTTTTCAATAGTAACATCAAAAAGCATTGGATATATATCCCTATGTGGATATGAAGGATTATCACGTGATGTCTTTCCTTCTCTTATTTGGTCTTGGATGTCTCCAACAATGAACCCACTATCATTCATTCACCCATTTGGAATTATGTCATCATCTCTAGCTTCGGCTAATTTGCACAAGAATTGTTTGGGGGATCTCTCACAAATGTTTAGAAGTCTTTCAAATCTTCGAAGTGTTCAGGTGCAATGTGAAACGGAGTTTCAACTATTTAAGGAATTAAGAAAAATTATGGATGAAATACATGGTGCAAATTTCACTGAATTAGAAATAACATCATATGCTTCACAAATCTCAAACAACTCCGACAGCTCTTATTTGATTGGAATGGGAAGCAACCAAGAAGTCTTCAATACTCTCAGCAAGAGCATATCAGAGGTATTGACAACCAATGTGTCATTTGATGATCTTTTGCTGAATGATAAGGATTGGTTGACCCATATAGGTGAAGGACATTCTGTGCTTTTCATGATGCCTCAAGATGGTCATCGTCACATAAAAGGAATGATTTTGTGTGTTTTTTATTCATCAAATCCTGAAAAGACGGTTGTTGAATGTCTTAATAGTGTCTTGATTGTTAATTACACAAAGTGCACCATCCAGATATACAAACGAGACACAGTAATTTCCTTTAATAATGAAGATTGGCAGGGCCTGATATCACATCTAGGATCGGGTGACAAAGTGGAGATTTTGGTAGCTTTTGTGCATGGTTTGGCCGTCAAGAAGACAGTTGTCTATCTAATATATGATGAATCAATTGATGCAAAAATGGAGCCTTCTCTGAAACGTCAAAGAAAGAGCTAA 2352 0.3656 MSACSASILRPYPIISTHLNKGNRQIWKAALVEAANVFGWEVRNFSNESTVVKQIVRTVFEKLDRNYLSITDFPVGLESRVEQVIRFLRNKASGVRIVGIWGMGGVGKSTIAKVIYNKLHHEFEDQSFLANIREAWEKDRGQIDLQEQLLSDILKIRKIKVHSIEWGKAMIKERLCIKRALLVLDDVNNFEQLNALCGKRDAIGPGSIIIITTRDLQFLDVLEVDYVYEVEELNEKKSLIKVERNNKLGMHDLLRDMGREIVRKRSTKEPEKRSRLWFHDDVLDVLTKNTGTNATEGLTLKLQGTSRYCFNTNALKEMKRLRLLQLDYIKLNGDYGYLSKQLRWICWRGFPLRYIPDKFYQGNAVAIDLKHSNLKVVWKEPQLLECLKILNVSHSKYLTNTPDFSKLPKLEELIMKDCPNLCKIHQSIGDLHNILLINLEDCTSLNNLPRVTYKLKSLKTLILSGCSKIDKLEEDIVQMESLTTLDAKNTAVKQVPFSIVTSKSIGYISLCGYEGLSRDVFPSLIWSWMSPTMNPLSFIHPFGIMSSSLASANLHKNCLGDLSQMFRSLSNLRSVQVQCETEFQLFKELRKIMDEIHGANFTELEITSYASQISNNSDSSYLIGMGSNQEVFNTLSKSISEVLTTNVSFDDLLLNDKDWLTHIGEGHSVLFMMPQDGHRHIKGMILCVFYSSNPEKTVVECLNSVLIVNYTKCTIQIYKRDTVISFNNEDWQGLISHLGSGDKVEILVAFVHGLAVKKTVVYLIYDESIDAKMEPSLKRQRKS* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00273 783 PRINTS Disease resistance protein signature 453 469 - -
Rops4g00273 783 PRINTS Disease resistance protein signature 174 188 - -
Rops4g00273 783 PRINTS Disease resistance protein signature 97 112 - -
Rops4g00273 783 SUPERFAMILY L domain-like 250 576 - -
Rops4g00273 783 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 219 IPR044974 GO:0006952
Rops4g00273 783 Gene3D Ribonuclease Inhibitor 309 660 IPR032675 -
Rops4g00273 783 Gene3D - 15 67 IPR035897 -
Rops4g00273 783 Pfam NB-ARC domain 78 264 IPR002182 GO:0043531
Rops4g00273 783 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 263 IPR027417 -
Rops4g00273 783 Gene3D - 68 230 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00273 Rops-Chr4 8458951 8463109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00273 237 499 WRKY Transcription Factor Family AT4G12020 33.333 2.39e-29 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00273 - - vra:106773317 808.135