Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00266 ATGAACCACACAGTGTTGGTGCCAAGCCTTCGTCGTGCCAAGTGTTCGTCTTCGTCGTGCCAAGCCTTCGTCTTCGTCAATGAACCAGAGAGTAACAGCTTTGTCATGGAATCCTTGCCTCCTCCTCCTTCCTCAAAATCCAGATCCCAATGGATATACAACGTGTTCATCAGTTTTAGGACGGTGGACACTCGCAAGAACTTCGTTTCTCATCTCTATGCTGCCCTCTCCAATGCGGGAATCAACACTTTTCTTTATGATGAAAAGCTTCCAAAGGGATATAAGATTGGGTCAGAAATATTGAAAGCGATAATAGATCCTCAGATTTTTATTGTGGTCTTCTCAAAGAACTATTGTTCCTCGACATGGTGCTTGGATGAACTTGTTAAGTTCCAAGAGAGGGTTCCAGTATCAGAAAGATGTATTGTGCCTATTTTCTATGATGTTGATCCATCTGAAGTGCGGAAACAGAGAGGTTGTTATGAGAAAGTCTTTGCAGAGCATGAAGAAAGATTAAAAAATGATATGATTAAAGTAAAAGAATGGAGAAAAGCTTTGACACAAGTGGCTAATTACTCTGGTTGGGATATCAGGAATAACAATGAAAGTATTATTGTGAAGCAAATTGTCGATGCAGTTTTGAAAAAACTAGACAAAAAATACTTATCTATTACAAACTATCCAGTTAGATCAGAATCCTACAAGGAAAAGGGAACAAATGCTACTGAGGGATTAACCTTGAAGTTGCAAGGAACCAGTAGATATTGCTTCAATACTAATGCTTTGAAGGAAATGAAGAGATTGAGACTGTTGCAACTTGATTATATAAAACTCAACGGAGATTATGGGTATCTTTCTAAGCAACTAAGATGGATCTGTTGGCGAGGATTTCCTTTAAGATACATACCTGACAAATTTTATCAAGGAAATGCAGTTGCAATTGACTTAAAACATAGTAAACTTAAACTAGTCTGGAAGGAACCACAGTTGTTGGAGTGTTTGAAAATCCTCAATGTTAGTCATTCCAAGTACTTGACAAACACCCCAGACTTTTCAAAACTATCAAAACTTGAAGAGCTCATTATGAAAGATTGTCCAAATTTATGCAAGATACATCAATCCATTGGAGATCTCCGCAATATTCTTCTGATAAATTTGGAGGACTGTAGCAGTTTTAACAATCTCCCAAGAGTGACATATAAGTTGAAATCTTTGAAAACTCTCATCCTTTCTGGTTGTTCAAAGATTGACAAATTGGAAGAAGATATAGTGCAGATGGAATCATTGACAACTCTAATTGCAGAAAATACTGCAGTGAAACAAGTTCCCTTTTCAATAGTATTGGAGTGGCTAAAAGTCCTTAATCTTAGTCATTCCAAGTACTTGACAATCACCCCTGACTTTTCAAAACTACCAAAACTTGAAAAGCTCATTCTGAAAGATTGTCCAAATTTGTGCAAGATACACCAATCTATTGGAGATCTCTGCAATATTCTTCTGATAAATTTGAAGGACTGTACCAATCTTTGCAATCTTCCAAGAGTTATATATAAGTTGAAATCTTTGAAAACTCTCATCCTTTCTGGTTGTTCAAAGATTGACAAATTGGAAGAAGATATAGTGCAGATGGAATCATTGATAACTCTAATTGCAGAAAATACTGCTGTGAAACAAGTACCCTTTTCAATAGTAAGATCAAAAAGCATTGGATATATATCCCTATGTGGATATGAAGGAATATCGTGTGATGTTTTTCCTTCTCTCATTTGGTCTTGGATGTCACCAACAATGAAGCCACTATCCTGTATTCACCCATTTGGAGTCATGTCGTCATCTCTAGTTTCCATTAATTTTCAGAATAAGTGTTTGGAGGATCTCTCATCAATGCTTAGCAATCTTTCAAAACTTCGAGGTGTTCAGATGCAATGCGAATCGGAGTTTCAACTATTTAAGAATTTGAGAACAATTCTGGATGACATATATGTTGAAAATCTTACAAAATTAGAAATAGCATCATCTGCTTGGCAAGAGCATATCAGAGGTTCCTTTTCTCTATCTTTGTCTTCTCACCTTTAA 2076 0.3646 MNHTVLVPSLRRAKCSSSSCQAFVFVNEPESNSFVMESLPPPPSSKSRSQWIYNVFISFRTVDTRKNFVSHLYAALSNAGINTFLYDEKLPKGYKIGSEILKAIIDPQIFIVVFSKNYCSSTWCLDELVKFQERVPVSERCIVPIFYDVDPSEVRKQRGCYEKVFAEHEERLKNDMIKVKEWRKALTQVANYSGWDIRNNNESIIVKQIVDAVLKKLDKKYLSITNYPVRSESYKEKGTNATEGLTLKLQGTSRYCFNTNALKEMKRLRLLQLDYIKLNGDYGYLSKQLRWICWRGFPLRYIPDKFYQGNAVAIDLKHSKLKLVWKEPQLLECLKILNVSHSKYLTNTPDFSKLSKLEELIMKDCPNLCKIHQSIGDLRNILLINLEDCSSFNNLPRVTYKLKSLKTLILSGCSKIDKLEEDIVQMESLTTLIAENTAVKQVPFSIVLEWLKVLNLSHSKYLTITPDFSKLPKLEKLILKDCPNLCKIHQSIGDLCNILLINLKDCTNLCNLPRVIYKLKSLKTLILSGCSKIDKLEEDIVQMESLITLIAENTAVKQVPFSIVRSKSIGYISLCGYEGISCDVFPSLIWSWMSPTMKPLSCIHPFGVMSSSLVSINFQNKCLEDLSSMLSNLSKLRGVQMQCESEFQLFKNLRTILDDIYVENLTKLEIASSAWQEHIRGSFSLSLSSHL* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00266 691 SUPERFAMILY L domain-like 260 637 - -
Rops4g00266 691 Gene3D Ribonuclease Inhibitor 449 689 IPR032675 -
Rops4g00266 691 SMART till_3 52 192 IPR000157 GO:0007165
Rops4g00266 691 FunFam Disease resistance protein (TIR-NBS-LRR class) 49 219 - -
Rops4g00266 691 Pfam TIR domain 53 226 IPR000157 GO:0007165
Rops4g00266 691 Coils Coil 533 553 - -
Rops4g00266 691 Gene3D Ribonuclease Inhibitor 239 448 IPR032675 -
Rops4g00266 691 Gene3D - 46 225 IPR035897 -
Rops4g00266 691 ProSiteProfiles TIR domain profile. 51 217 IPR000157 GO:0007165
Rops4g00266 691 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 243 422 IPR044974 GO:0006952
Rops4g00266 691 SUPERFAMILY Toll/Interleukin receptor TIR domain 43 195 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00266 Rops-Chr4 8298974 8316939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00266 278 560 WRKY Transcription Factor Family AT5G45050 29.225 2.89e-22 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00266 - - mtr:25495407 449.129