Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00263 ATGGAGCTTGTGCTCTTGAAGACTCTGCTCCAACGATTATGGGAGGTGGCCAACCGGTCTGTGCATGGAGCTCTCGAGAAGTTTAAGGGTAATGGGTGCTTGATATGGACCAAAGAAATGCCTCTACCAAGGTCGAGGGAGCCCGAAAACGCGACTCTTGGTCCTGCTGTCAGAGACGGTGAACATGTTTTTGGTGTGGCTTGCATCTTTGTATCATTTAATGACACCTTCATTCATGTGACTGATTTGTCTGGGAAGGAAACGCTTGTCCGCATCGCTGGTGGAATGAAGGTTGAAGCTGACAGAGATGAGTCATCCCCATATGCTGCTACGCTTGCAGCACAAGATGTTGCTGCCAGATGCAAGGAGCTGGGCCTAACGACTCTTCATATCAAGCTTCGTGCAACTAGAGGACACAAGCCGAAAACACCTGGCCCTGGTGCTCAGTCTGCTCTCCGTGCCTTGGCTCGGTCAGGAGTGAAAGCTGGTCGCGTAGAGGATGTGACTCCAATTCCTTCGGATAGCACTCGTAGAAAGAGTGGTAGAAGGGGTAGGAGGCTTTGA 564 0.5106 MELVLLKTLLQRLWEVANRSVHGALEKFKGNGCLIWTKEMPLPRSREPENATLGPAVRDGEHVFGVACIFVSFNDTFIHVTDLSGKETLVRIAGGMKVEADRDESSPYAATLAAQDVAARCKELGLTTLHIKLRATRGHKPKTPGPGAQSALRALARSGVKAGRVEDVTPIPSDSTRRKSGRRGRRL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00263 187 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 47 180 IPR001971 GO:0003735|GO:0005840|GO:0006412
Rops4g00263 187 Hamap 30S ribosomal protein S11 [rpsK]. 44 184 IPR001971 GO:0003735|GO:0005840|GO:0006412
Rops4g00263 187 FunFam 40S ribosomal protein S14 38 187 - -
Rops4g00263 187 Pfam Ribosomal protein S11 65 183 IPR001971 GO:0003735|GO:0005840|GO:0006412
Rops4g00263 187 MobiDBLite consensus disorder prediction 157 187 - -
Rops4g00263 187 Gene3D Ribosomal protein S11 42 187 IPR036967 GO:0003735|GO:0005840|GO:0006412
Rops4g00263 187 SUPERFAMILY Translational machinery components 60 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00263 Rops-Chr4 8168824 8169387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00263 44 176 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 79.259 4.78e-76 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00263 K02955 - gmx:100786325 228.024