Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00245 ATGACTTCGTACGACGGAGCTCCGGGAAGAATGATGAGCCGGTGGCTGGAAAACGACTTTAAGAGCGGCGGCGGCGGAGGAGGTGGATTTACGGGTGGAGGAAGAAGAGGGCGCCGTCCGTCGGAGCAAAACACAAAGGATTTGTTTGGTGGTGGTGTTGTTGCTTTTAGAATTGATTATGAAGCTGTGTTTGGAACTGGGTTTCTGGTTTTTTTTTCAGGGACGGTGGTGGAAAGTGGAGAAGATGAGAGGGACAAAAACGACAGAGCCTATGTTACAGAGATACTAAATGGTTGTGATTTATGTGCTAACATTGGAATAACAGTCTTGGTAGAAAGGAGCCTCATAAAAGTTGAAAAAAATAACAAGCTTGGAATGCATGGTTTGCTTCGAGACATGGGAAGAGAAATTGTTCGTGGAAGTTCACTCGAGGAGCCCGAGAAGCGTAGTCGATTGTGGTTTCATGAGGATGTACTTGATGTATTGACAGACCAAACTGGAACAAAAGCTGTTGAAGGTTTATCTTTGAAGTTGCAAAGGACTAGTAGAATGGCTCTCTTGGCAAGGATTTCCTTTAAAATTCATACCCAACAACTTTTATCTGAAAAATCTTGTTGCTATGATTTAAAAAGCAGTAATCTTAAACAAGTTTGGAACAAGACGCAGCTGTTGGAGAAACTAAAAATCCTCAATCTTAGTCATTCCATGTACTTGACAAATACCCCTGACTTCTCAACAGTACCAAATCTTGAAAGGCTTATTCTCAAGGATTGCCCAAATTTGTCTGAGGTACACGAATCCATTGGCAATCTCAGTAATCTTCTTTTGATAAATTTGACAAAGTGTACAAGCCTTAACAATCTCCCAAAAACGATCTATCAGTTGAAATCTTTAAAAACTCTCATACTTTCCGGTTGTTCAAAGATTGACAAGCTAGAAGAAGATATAGTGCAGATGACATCCTTGACAACTCTAATTGCAGACAACACTGCTGTAAAACAAGCACCTTTTTCGATAATCAGATCAAAAAATATTGGATACATAAGTCTTTGTGGATATGAAGGATTAGCACGTGATGTATTTCCTTCTCTCCTTTGGTCTTGGATATCACCAACAATGAATCCCATGTCCTATATTCCTTCATTCTGGAGCATCTCTTCATCTCTAGCTTTCATGGATGTACAAGATAATAATTTGGATCATCTGTCACCAATGATTAGAAGCTTTTCAAAACTTCGAAGTGTTTGGGTGCAATGCAAGACGAAATTTCAACTATCTCAAGAATTGAAAAGAATTCTAGATAACACATACTATGATGCAAAAATTTCTGATTTGGCAACAACATCATATGCAATAGCATCACAAATCTCAGAGCATTCATTGAGGTCTCTTTTGATTGGAATGGGAAGTTACCACCAGGTCCTCGATGTTGTTAGCAAAAGCATATCAAAGATATATAAGCGAGGAACTGCAGTTTCCTTTAATAATGAAGATTGGCAGGGCATAATATCAAATGTAGGACCTGATGATGAAGTGGAGATTTGTGTTGCTTTTGGGCGAGGATTGACTGTCAAGAGGACCACTGTCTATCTAATATATGATGAATCAATTAAAGTAAATATGGAGCCTTCATCACCTCCAAAGAAAAAATTTCGAGAAGACATATAA 1668 0.3885 MTSYDGAPGRMMSRWLENDFKSGGGGGGGFTGGGRRGRRPSEQNTKDLFGGGVVAFRIDYEAVFGTGFLVFFSGTVVESGEDERDKNDRAYVTEILNGCDLCANIGITVLVERSLIKVEKNNKLGMHGLLRDMGREIVRGSSLEEPEKRSRLWFHEDVLDVLTDQTGTKAVEGLSLKLQRTSRMALLARISFKIHTQQLLSEKSCCYDLKSSNLKQVWNKTQLLEKLKILNLSHSMYLTNTPDFSTVPNLERLILKDCPNLSEVHESIGNLSNLLLINLTKCTSLNNLPKTIYQLKSLKTLILSGCSKIDKLEEDIVQMTSLTTLIADNTAVKQAPFSIIRSKNIGYISLCGYEGLARDVFPSLLWSWISPTMNPMSYIPSFWSISSSLAFMDVQDNNLDHLSPMIRSFSKLRSVWVQCKTKFQLSQELKRILDNTYYDAKISDLATTSYAIASQISEHSLRSLLIGMGSYHQVLDVVSKSISKIYKRGTAVSFNNEDWQGIISNVGPDDEVEICVAFGRGLTVKRTTVYLIYDESIKVNMEPSSPPKKKFREDI* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00245 555 SUPERFAMILY L domain-like 126 416 - -
Rops4g00245 555 MobiDBLite consensus disorder prediction 19 44 - -
Rops4g00245 555 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 89 336 IPR044974 GO:0006952
Rops4g00245 555 Gene3D Ribonuclease Inhibitor 175 470 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00245 Rops-Chr4 7853880 7857721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00245 88 339 WRKY Transcription Factor Family AT4G12020 29.043 7.48e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00245 - - gmx:100809413 457.218