Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00236 ATGATCAAGGAAAGACTCTGCACAAAAAGGGCACTTATTGTACTTGACGATGTGAATAAGTTTGAGCAAATAAATTCGTTGTGTGGAAATCGAGATGGGATTGGTCCAGGAAGTATAATAATCATTACAACAAGAGATGTACATCTACTTGATATCCTTGAAGTTAACTATGTCTATGAAGTGGAGGAATTGAATGAAAGGGAGTCTCTTGAGCTTTTTAGTTGGCATGCTTTCAGGGAAGCTAGTCCAAGAGAAGGCTTCCTTAGTCTATCAAAAAATGTGGTTGCTTATTGTGGAGGACTACCACTAGCTCTTGAAGTCCTTGGATGTTACTTATACAAGAGAAAAAAAGAAGACTGGCAAAGTGTATTTTCAAAACTAAAAAAAATACCCAATTATCAAATACAGGAGATACTAAAAATAAGTTTTGACGGTTTAAGGGATGATATGGAGAAGGATGTATTTCTTGACATATGTTGTTTTTTTATTGGCAAAGATAGAGCCCATGTTACGGAGATACTAAATGGCTGTGGCCTACATGCTGATATTGGAATAACAATTCTGGTAGAAAGGAGCCTTGTAAAAGTTGAAAGAAATAACAAACTTGGAATGCATGATTTGCTACGAGACATGGGAAGAGAGATTGTTCGCAAAAGTTCAACAAAGAAACCTGAGAAGCGGAGTCGAGTGTGGTTTCATGAGGATGCACTTGATGTATTGGCAAAAAATACTGGAACAAAAGCTATTGAGGGATTATCCTTGAAGTTGCATGGAATCGATAGATATCACTTAGATGCTAATGCTTTTAAGAAAATGAAGAGATTGAGATTGTTGCAACTTGATCATGTACAAATCAACGGAGATTATGGGTATCTTTCTAAGCAACTAAGATGGATTTGTTGGCAAGGATTTCCTTTAAGATACATACCTCACAAATTTTATCAGGGAAATGTAGTTGCAATTGACTTAAAACACAGCAATCTTAAACTAGTCTGGAAGAAACCCAAGTTGCTAGAGTGGCTGAAAATTATTAATCTTAGTCATTCTAAGAATTTGACAAACACCCCTGACTTTTCAAAACTACCAAATCTTGAAAAGCTCATTCTAAAAGATTGTCCAAATTTGTGCAAGATTCACCAGTCGATTGGAGATCTCCGCCATATTCTTCTAATTAATTTGGAGGACTGTACAAGTCTTACCAATCTCCCAAGAGTGATATATAAGTTGAAATCTTTGAAAACCCTCATCCTTTCTGGTTGTTCAAAGATTGACAAATTGGAAGAAGATATAGTGCAAATGGAATCCTTGGTAACTCTTATTGCAGAAAATACTGCTGTGAAACAATTACCCTTTTCAATAGTTAGATCAAAAAGCATTGGATATATATCCCTATGTGGATTTGAGGGATTATCACGTGATGTTTTTCCTTCTCTCATTTGGTCTTGGATGTCACCAACAATGAAGCCACTATCATGTATTCACCCATTTGGATACATGTCGTCGTCTCTAGTTTCCATTAATTTGCAGAATAATAGTTTGGAGGATTTCTCACCAATGATTAGAAGTCTTTCAAAACTTCGAAGTGTCCAAGTTCAATGTGAAACGGAGTTTCAATTATCTAAGGAATTAAGAACAATTCTGGATGACATATATGATGTAAATTTTATTGAATTAGAAATAACATCATATGCTTCACAAATCTCAAACCATTCCTTGAGGTCTTATTTGATTGGGATGGGAAGTTACGAAGAAGTTTTCAACACTCTCAGCAAGAGCATATCAGAGGGATTAACAAATAATGGGTCACTTGATGTTCTTTTGCCGGGTGATAATTATCCTTATTGGTTAACCCATACAGTTGAATGTCTTATTAGTGTCTTGATCATTAATTACACAAAGTGTACCATCCATATATACAAGCGAGACACAGCAATTTCCTTTAATGATGAAGATTGGCAGGGCCTAATATCACATCTAGGATTTGGTGACAAAGTGGAGATTTTTGTAACTTTTGGGCATGGATTAGCTGTCAAGAAGACAATTGTCTATCTAATATATGATGAATTACTTGACGTGGAAATGGAACCTTCTCTGGAGCCAAAGAAAGGACCAAAGAAAAATGCATTTGTAAGATTCATAAAGAAAATAGTGATATGA 2157 0.3547 MIKERLCTKRALIVLDDVNKFEQINSLCGNRDGIGPGSIIIITTRDVHLLDILEVNYVYEVEELNERESLELFSWHAFREASPREGFLSLSKNVVAYCGGLPLALEVLGCYLYKRKKEDWQSVFSKLKKIPNYQIQEILKISFDGLRDDMEKDVFLDICCFFIGKDRAHVTEILNGCGLHADIGITILVERSLVKVERNNKLGMHDLLRDMGREIVRKSSTKKPEKRSRVWFHEDALDVLAKNTGTKAIEGLSLKLHGIDRYHLDANAFKKMKRLRLLQLDHVQINGDYGYLSKQLRWICWQGFPLRYIPHKFYQGNVVAIDLKHSNLKLVWKKPKLLEWLKIINLSHSKNLTNTPDFSKLPNLEKLILKDCPNLCKIHQSIGDLRHILLINLEDCTSLTNLPRVIYKLKSLKTLILSGCSKIDKLEEDIVQMESLVTLIAENTAVKQLPFSIVRSKSIGYISLCGFEGLSRDVFPSLIWSWMSPTMKPLSCIHPFGYMSSSLVSINLQNNSLEDFSPMIRSLSKLRSVQVQCETEFQLSKELRTILDDIYDVNFIELEITSYASQISNHSLRSYLIGMGSYEEVFNTLSKSISEGLTNNGSLDVLLPGDNYPYWLTHTVECLISVLIINYTKCTIHIYKRDTAISFNDEDWQGLISHLGFGDKVEIFVTFGHGLAVKKTIVYLIYDELLDVEMEPSLEPKKGPKKNAFVRFIKKIVI* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00236 718 Gene3D - 63 147 IPR042197 -
Rops4g00236 718 Coils Coil 423 443 - -
Rops4g00236 718 Gene3D Ribonuclease Inhibitor 217 404 IPR032675 -
Rops4g00236 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 158 IPR027417 -
Rops4g00236 718 Gene3D Ribonuclease Inhibitor 405 611 IPR032675 -
Rops4g00236 718 Gene3D - 1 58 IPR027417 -
Rops4g00236 718 Pfam NB-ARC domain 1 131 IPR002182 GO:0043531
Rops4g00236 718 SUPERFAMILY L domain-like 204 529 - -
Rops4g00236 718 PRINTS Disease resistance protein signature 5 19 - -
Rops4g00236 718 PRINTS Disease resistance protein signature 98 112 - -
Rops4g00236 718 PRINTS Disease resistance protein signature 407 423 - -
Rops4g00236 718 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 533 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00236 Rops-Chr4 7749647 7753166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00236 352 464 WRKY Transcription Factor Family AT5G45050 31.858 4.47e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00236 - - gmx:100806743 1001.12