Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00232 ATGAGAGGAAATCTTCACAACACTATGCATCATCCCCATCACAGTCAACAACAAGGAGGGAGTCCAAGCTCTAGTAAAGTTGAAGCCATAAAAGCCAAAATCAATGCTCATCCTCAATACTCTAGTCTTTTAGAAGCTTACATGGATTGCCAAAAGATAGGAGCTCATGGGAAGTGGTGGCGCGTTTGGTTGCGGCAAGGCAAGAGTTTGAGGCACGGCAAAGATCTTCAGCTGGCACAAAGGAATCTTCCAAAGACCCAGAACTTGACCAATTCATGGAAGCTTACTACGACATGCTTGTGA 303 0.4488 MRGNLHNTMHHPHHSQQQGGSPSSSKVEAIKAKINAHPQYSSLLEAYMDCQKIGAHGKWWRVWLRQGKSLRHGKDLQLAQRNLPKTQNLTNSWKLTTTCL* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00232 100 SMART KNOX1_2 28 72 IPR005540 GO:0003677|GO:0005634
Rops4g00232 100 MobiDBLite consensus disorder prediction 1 28 - -
Rops4g00232 100 Pfam KNOX1 domain 29 55 IPR005540 GO:0003677|GO:0005634
Rops4g00232 100 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00232 Rops-Chr4 7607034 7607336 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00232 25 55 Homeobox Transcription Factor Family AT4G08150 77.419 1.35e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00232 - - gmx:100800822 84.7297