Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00226 ATGGGTATTTCTAGGGATTCTATGCACAAAAGACGTGCCACTGGTGGCAAGCAGAAGGCATGGAGGAAGAAGAGAAAGTATGAGCTTGGTCGCCAGCCAGCTAACACTAAGCTATCAAGCAACAAGACTGTCAGGAGGATTCGTGTTAGAGGTGGCAATGTGAAGTGGAGGGCACTGAGATTGGATACTGGAAATTACTCATGGGGAAGTGAGGCTGTAACTCGCAAAACTCGTATACTGGATGTGGTTTACAATGCCTCAAACAATGAGCTTGTGCGAACTCAGACTCTTGTCAAAAGTGCTATTGTTCAGGTTGATGCCGCTCCATTCAAGCAGTGGTACCTTCAGCACTATGGTGTTGACATTGGTAGGAAGAAGAAAACAGCTGCCAAGAAGGACTCAGAGGAGGGTGATGCTGCTGCAGAAGAAACCAAAAAGAGTAACAATGTGCAAAGAAAACTGGAGAAGCGCCAGAAGGATCGTAAGCTTGATCCCCACATTGAAGAGCAGTTTGGTGGTGGGCGATTGCTGGCTTGCATTTCTTCTCGACCTGGCCAATGTGGCAGGGCTGATGGCTACATTCTGGAAGGTAAGGAGCTTGAATTTTACATGAAGAAACTCCAGAGGAAGAAGGGAAAGGGTGCTGCTTAA 651 0.4716 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTAAKKDSEEGDAAAEETKKSNNVQRKLEKRQKDRKLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00226 216 FunFam 40S ribosomal protein S8 160 213 - -
Rops4g00226 216 CDD Ribosomal_S8e_like 5 195 - -
Rops4g00226 216 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Rops4g00226 216 MobiDBLite consensus disorder prediction 131 166 - -
Rops4g00226 216 Gene3D - 161 213 - -
Rops4g00226 216 Gene3D - 32 160 - -
Rops4g00226 216 FunFam 40S ribosomal protein S8 32 159 - -
Rops4g00226 216 PANTHER 40S RIBOSOMAL PROTEIN S8 1 213 IPR001047 GO:0003735|GO:0005840|GO:0006412
Rops4g00226 216 Pfam Ribosomal protein S8e 5 195 IPR022309 -
Rops4g00226 216 MobiDBLite consensus disorder prediction 1 40 - -
Rops4g00226 216 NCBIfam ribosomal protein eS8 1 197 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00226 Rops-Chr4 7278738 7281693 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00226 1 204 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.784 4.92e-127 355