Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00225 ATGGGTTGCACCAACAGTGTTCTCCGCAGGAGCATGTTGAGTGATCTACTTCACTTGTGGTCTCAGTACCTGTGCACCTGTGAGTTGGAACAAAACGTTTTAAGGCAACATCAGGTTTTCTTTCGGCAAAAACAAAAAGCATCTCTTCGTCTTTGCTCTCCCGTGGTTCTGCCTCTGCTGCACCGTCGAAACGCCGTGGCCCTTGCCGTCATTGCGCCGCCGCTGTCCCCGTCGAAACGCCGTGGCCCCTGCCGTCATTGCGCCGCCGCTATCTCGCCCTTGCTGTGTCGTTGCTCTTCTGCCGTCGCGTCGTCGTCCTGCTACCGTCACGCCGTCGCAACTCCACCGCCTCATTCTACAAGTATCAATCGTTTATTTATTTGGGTTGCTGCCAATGGGTTGTTGTCAATGGAGGTTGTTCTTCATAGAGGTGGTTGTCGTCAGTGGGGTTTCTTCTTGCTTCTTGTTCATCATGCCCCCCATTTTGAAGTTGATTTCGTCCCTCCATCTGATGCCCACAAGTATTCCTGGGTAGATCCAGAACCCCTAGGAGTGAAGTCCAAATTTCACTCGGAAGACCTCACCCTTCTTACGGAGGTCCTCCAGGAGAATGAGGACGCGGAGCAACCGTTGCATGCAGCAGCAGAAGCAAAAGCCCTGGTTCTCAAGACAGAACTTTGTCGTTTCAGTGGGGCGAAGATCTACCCTGGGAGAGGCATCAGATTGGTTCGTGGGGATTCTCAGGTCTTCATGTTTTCCAACTCGTAA 768 0.5247 MGCTNSVLRRSMLSDLLHLWSQYLCTCELEQNVLRQHQVFFRQKQKASLRLCSPVVLPLLHRRNAVALAVIAPPLSPSKRRGPCRHCAAAISPLLCRCSSAVASSSCYRHAVATPPPHSTSINRLFIWVAANGLLSMEVVLHRGGCRQWGFFLLLVHHAPHFEVDFVPPSDAHKYSWVDPEPLGVKSKFHSEDLTLLTEVLQENEDAEQPLHAAAEAKALVLKTELCRFSGAKIYPGRGIRLVRGDSQVFMFSNS* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00225 255 Gene3D Ribosomal protein L24e 222 255 IPR038630 -
Rops4g00225 255 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 225 255 - -
Rops4g00225 255 Pfam Ribosomal protein L24e 223 255 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00225 Rops-Chr4 7269927 7276161 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00225 220 255 Cytoplasmic Ribosomal Protein Gene Family AT3G53020 80.556 3.50e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00225 K02896 - dct:110104037 70.4774