Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00213 ATGTGGGCAGTGTCCTACTTGGAAAAGACTGGCATGCCCCTTATAACAGAAAAAGAGTGCACCTTTAAAGGGGTAATGAGGCATATACTACATGCTACTTCAGATTTTGAAATGAGGCTATTATGGTTGTCAAGTAGGTTAAGGTCAAAGGGAAGAGACTGGCATGAAACTGTCAAAAATTGTGGGTATAGTAAGAGGAGACGCCATGGTTCATCAATATATGTGGAAAAGAAAATACCATTTATTGGGATATTGAGCAACAAAGCTAAGGAAATTCCATATTTTTCAGTGAAAATTCATTATTGTGATGGTGCATCATTTAGAGAGGATAGTCAACATCAGGCAGCAGGGTTATATCTCAGAGAGCAACGCATCTGGCAAGCTGCTATGGAAGACTTAATGTCAAAAGGGATGCGCTATGCCATACCGGCTTTTCTATCTGGATACTCTGTAGGAGGCTTAGCTTCTATACTGCATTATGATGAATTTCGGGAATTGTTTCCTATAACCACAAGAGTACAGTGCTTAAATGATGCTGGATTATTCCTTGATGTTGTTGATGTATCTGGTCGTCGCAGTTTAAGGAATATATTAAGAAGTGTGGTCACCTTACAGTGA 618 0.3948 MWAVSYLEKTGMPLITEKECTFKGVMRHILHATSDFEMRLLWLSSRLRSKGRDWHETVKNCGYSKRRRHGSSIYVEKKIPFIGILSNKAKEIPYFSVKIHYCDGASFREDSQHQAAGLYLREQRIWQAAMEDLMSKGMRYAIPAFLSGYSVGGLASILHYDEFRELFPITTRVQCLNDAGLFLDVVDVSGRRSLRNILRSVVTLQ* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00213 205 PANTHER NOTUM-RELATED 48 205 IPR004963 GO:0016787
Rops4g00213 205 Pfam Pectinacetylesterase 50 205 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00213 Rops-Chr4 7023617 7028342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00213 42 205 Carbohydrate Esterase AT3G05910 54.762 2.25e-57 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00213 K19882 - gmx:100791571 223.787