Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00205 ATGGAAAGATATAAAATTTTGAGAGAGCTTGGAGATGGCTCTTGCGGTCATGTATATAAAGCCCGTGATATGAGAACTTATGAGATTGTTGCTGTCAAAAGGTTGAAAAGAAAGTTTTTCTTCTGGGAAGAATACACAAATTTAAGAGAAATTAAGGTTCTACGTAAAATGAATCATCCAAATATCATAAAGTTGAAAGAGGTTGTTAGAGAAAATAATGAACTGTTTTTCATTTTTGAATACATGGATTGTAATCTTTATCAATTAATAAAAGAGAGAGAGAAGCCCTTTACAGAGGAAGAGATACGGTGCTTTATGAAACAAGTACTGCAAGGACTCAGTCACATGCACAAGAAAGGATTCTTTCATCGAGATTTAAAACCTGAAAATTTGCTGGTGACAAATGATATTCTTAAAATTGCTGATTTTGGACTGGCTAGAGAAGTATCATCGATGCCTCCTTATACTCAATATGTTTCCACACGGTGGTACCGAGCTCCAGAAGTTTTGTTGCAGTCCCCCTGTTATACTCCTGCTGTTGACATGTGGGCTGTTGGTGCTATATTAGCTGAGCTTTTTACTTTGAACCCCATATTTCCTGGTGAAAGTGAGATAGATCAACTATATAAAATATACCGTGTACTTGGTATGCCAGACTTATCTGCCTTCACCACAGGGGCTAACAATTCTCGGCTGTTGGACCTTGTTGGTCATGAAGTTGTTTCACCTATGAAGCTTTCTGATATCATTCCAAATGCTAGCTTGGAAGCTATAGATTTGATCACACAACTGTTATCATGGGATCCATCAAGGAGGCCAGATGCAGATCAGTCATTGCGACATCCTTTTTTCCACGTGGATAAATGGGTTCCTTGTCCGCTCAATGATCCACTAGAGCTGAAGCTGAGTAGCAAGAGGGCAAAGCCAAATCTTGAGCTAAAACTGCAGGATTTTGGCCCAGATCCCGATGATTGTTTTCTTGGATTGACATTAGCTGTAAAGCCCAGTGTTTCAAACTTGGATGTGGTCCAAAATGTATCTCAGGGTATGAGAGAGAATGTGCTATTTTGCTCGGATTTTAATGAACATTCAGACCAGTCAGTATTTTGGACATTATTATCTCCTGATCAAAATGGAGTTCATAACTCAGCAGAGACTTCATTGTCATTGTCATTCGGTCCTTTTGACAGATCAGCTCCACATCCATCAATTGGAGTTCCACAGTCAGCGGGATATTCTTTTCAGCCTTTGCAGCCTAACTTCTTAACTACACCATTTTTGGCTCTGTCTTCTTCTCCATTCAAGCGCAGGCACTGCCTTTGA 1323 0.3961 MERYKILRELGDGSCGHVYKARDMRTYEIVAVKRLKRKFFFWEEYTNLREIKVLRKMNHPNIIKLKEVVRENNELFFIFEYMDCNLYQLIKEREKPFTEEEIRCFMKQVLQGLSHMHKKGFFHRDLKPENLLVTNDILKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLQSPCYTPAVDMWAVGAILAELFTLNPIFPGESEIDQLYKIYRVLGMPDLSAFTTGANNSRLLDLVGHEVVSPMKLSDIIPNASLEAIDLITQLLSWDPSRRPDADQSLRHPFFHVDKWVPCPLNDPLELKLSSKRAKPNLELKLQDFGPDPDDCFLGLTLAVKPSVSNLDVVQNVSQGMRENVLFCSDFNEHSDQSVFWTLLSPDQNGVHNSAETSLSLSFGPFDRSAPHPSIGVPQSAGYSFQPLQPNFLTTPFLALSSSPFKRRHCL* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00205 440 FunFam Probable serine/threonine-protein kinase DDB_G0268078 83 291 - -
Rops4g00205 440 Pfam Protein kinase domain 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00205 440 Gene3D Transferase(Phosphotransferase) domain 1 82 284 - -
Rops4g00205 440 SMART serkin_6 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00205 440 CDD STKc_MAK_like 4 284 - -
Rops4g00205 440 ProSiteProfiles Protein kinase domain profile. 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00205 440 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 310 - -
Rops4g00205 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Rops4g00205 440 FunFam Serine/threonine-protein kinase MHK 1 83 - -
Rops4g00205 440 Gene3D Phosphorylase Kinase; domain 1 4 81 - -
Rops4g00205 440 SUPERFAMILY Protein kinase-like (PK-like) 1 285 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00205 Rops-Chr4 6757356 6771515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00205 7 284 MAP Kinase Gene Family AT4G01370 40.418 1.14e-62 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Rops4g00205 Pkinase 1.6e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00205 K08829 K08830 gmx:100792842 808.905