Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00154 ATGGATCTTCCTTCTCCTTATGTGCTAATTATTGTAGGAACCTTAGCCTTGATTGTACACTTGGTCTTTAGATCCATTAAATCACCTAATGGACCTAACAAAGGCTGCACCAAGCATAACAAAATACCTGAACCATGTGGTGCTTTGCCTTTCATAGGTCACCTCCATCTTCTAAATTCTCATGAACCTTATTTTAGAACCTTCTCAGTCATGGCTCAAAAGTATGGCCCAATTTTCTCCCTCAGGCTTGGTTGCAACAACACAATAGTGGTGAATAGCAGGGAATTCGCCAGGGAATTCCTCATAACAAATGACAAAGTTTTTGCCTCAAGGCCTAATACAGCTGGAGGGAGATACATGGGTTACAACAATGCTATTTTTGCTCTTGCCCCTTATGGAAATTACTGGCGTGACATGAGAAAAATTGCCACTCTTGAGCTTTTATCAAGTCACAGGCTTGAAAAGCTTAAGCATGTAAGAGACACAGAGATATATTCTCTTGTCAAAGATTTGTACTCATTTGCAAAGAATCAAGACTCAATTCAAGTGCCTATAAGCAATTTATTAGAGCATATGACCTTCAATATAATTGTGAGGATGATAGCTGGGAAGAGATTTAGTGGTGTAACCATTAATCAAGAAGATAGTGAAGCATGGAGATTAAGGAGGGCAATCAAAGATGCCACATATCTTTTTGGTGTTTTTGTGGTGGCTGATGCTATTCCTTGGCTTAGTTGGTTTGATTTTCAAGGGCATGTGGGTTTCATGAAGAGGATTGCTAAGGAAATAGATGTTATTCTTGATAAGTGGATGCATGAACATCTAAGGAAGAGAGGTGAGAATGAGAATGGTGTTTGTGAAGATGATTTCATGGACGTGTTGATATCATTGTTCGAGGAGCATGATGTGATTTGGGAACACAAGCGTGAGATAGGTATCAAAGCAACAGCACTGATCCTTATCCTTACAGCCTCAGGAAGCACGGCCATAACACTAACATGGGCACTTTCCTTACTCCTAAACCATCCAAATGCCCTAAAAGCTGCCCAACAAGAACTTGACACCAATGTAGGAAAACACAAATGGGTACAAGAATCTGACATCAATAACCTCAATTATCTCCAAGCCATTATCAAAGAGACCCTTCGTCTATACCCACCAGCACCTTTAACAGGAATAAGGGAAGCCACAAATGATTGCCACGTGGCAGGTTACCATGTCCCAAAAGGAACTCGTTTGCTTATTAACCTATGGGAGCTACAAAGGGACCCACAAATATGGTCCAACCCTAATGAGTTTCAACCTGAGAGGTTCCTCACAAGTAATGTGGTCAATGATTTTCAGAACAGGAACTTCGGGTTTATCCCATTTAGCTATGGAAGAAGGTCTTGTGCTGGCATGACATTTGGGTTGCAAGTGCTACACTTGACTCTGGCTAGGTTGCTTCAAGGGTTTGATATATACACAAAAGGAGGTGTTCAAGTTGATATGAGTGAAGGTTTAGGAGTGGCCTTGCCCAAGGAAAATGGACTTGAAGTTATGCTCAAACCACGTCTTCCTTTGGAGCTTTATGAAAGTCTTTGA 1584 0.4104 MDLPSPYVLIIVGTLALIVHLVFRSIKSPNGPNKGCTKHNKIPEPCGALPFIGHLHLLNSHEPYFRTFSVMAQKYGPIFSLRLGCNNTIVVNSREFAREFLITNDKVFASRPNTAGGRYMGYNNAIFALAPYGNYWRDMRKIATLELLSSHRLEKLKHVRDTEIYSLVKDLYSFAKNQDSIQVPISNLLEHMTFNIIVRMIAGKRFSGVTINQEDSEAWRLRRAIKDATYLFGVFVVADAIPWLSWFDFQGHVGFMKRIAKEIDVILDKWMHEHLRKRGENENGVCEDDFMDVLISLFEEHDVIWEHKREIGIKATALILILTASGSTAITLTWALSLLLNHPNALKAAQQELDTNVGKHKWVQESDINNLNYLQAIIKETLRLYPPAPLTGIREATNDCHVAGYHVPKGTRLLINLWELQRDPQIWSNPNEFQPERFLTSNVVNDFQNRNFGFIPFSYGRRSCAGMTFGLQVLHLTLARLLQGFDIYTKGGVQVDMSEGLGVALPKENGLEVMLKPRLPLELYESL* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00154 527 Gene3D Cytochrome P450 34 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00154 527 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00154 527 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00154 527 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00154 527 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00154 527 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00154 527 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00154 527 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00154 527 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00154 527 Pfam Cytochrome P450 44 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00154 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Rops4g00154 527 SUPERFAMILY Cytochrome P450 42 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00154 527 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00154 527 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00154 527 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00154 527 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00154 527 PANTHER CYTOCHROME P450 82C3-RELATED 18 524 - -
Rops4g00154 527 FunFam Cytochrome P450 82C4 33 516 - -
Rops4g00154 527 CDD CYP82 76 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00154 Rops-Chr4 5012836 5016734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00154 43 524 Cytochrome P450 AT4G31940 50.607 6.72e-167 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00154 K17961 - gmx:100787489 770