Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00144 ATGGCTTCCTCTGCTTCTAAATTCTCTACCATGTTTCTGTTCTTCTGCGTTGCCCTCCTCCTTTTCCATGCCAGTGAGATAGAAGCAAATGTTTGTGAAAGGCGTAGCAAAACATGGTCAGGGCCTTGTTTAGACACGGGAGCTTGTAAAAATCAGTGCATCAATGTGGAACATGCAACTTTTGGAGCTTGTCACCGTGATGGCCTTGGTTTTGCTTGCTTCTGCTACTTCAATTGCTGA 240 0.45 MASSASKFSTMFLFFCVALLLFHASEIEANVCERRSKTWSGPCLDTGACKNQCINVEHATFGACHRDGLGFACFCYFNC* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00144 79 Pfam Gamma-thionin family 31 79 - -
Rops4g00144 79 Gene3D - 31 79 IPR036574 -
Rops4g00144 79 PANTHER DEFENSIN-LIKE PROTEIN 1 1 76 - -
Rops4g00144 79 SMART gth_4 31 79 IPR003614 GO:0006952
Rops4g00144 79 SUPERFAMILY Scorpion toxin-like 30 79 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00144 Rops-Chr4 4724287 4724642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00144 10 79 Plant Defensins Gene Families AT1G19610 50.685 1.43e-21 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00144 - - mtr:25500300 130.183