Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00111 ATGGAATTACACTGCGTTTGGTTGTTTTCTGCCACTTTGTTGGCATGCTACATTTTTGTAACCAAATTTGTGAGGAGTTTGAATGGGTGGTATTATGATCTGAAGCTAAGAAACAAACAGTACCCTTTGCCTCCGGGTGATATGGGATGGCCTCTTCTTGGCTATCTATTGACCTTTGTGAAGGATTTCAAATTCGGTGACCCTAATTCATTCATCAACAACCTTCTTTCTAAATATGGACAAACTGGTATCTACAAGACTCACTTGTTTGGGAATCCATGCATCATTGTGTGTGAGCCTGAGATGTGCAAGCAAGTGCTGCTAGATGATGAGAACTTTAAGATGGGTTATCCAAAATCCACCATGGAGGTGACACAAGGTACAACCATATGGAATTACTCTAGTGCAGAACACAGGCGATTTCGACGCCTAGTCTATGCTCCCATCGTGGGTCACAATGCATTAGCAATGTACCTAGAACGAATAGAGGACATTGTGGTCAATTCGTTAGAAGAATTGTCCAGCATGAAACACTCGGTTGAGTTTTTGGAAGAGATGAAAAAGCTTTCCTTTAAAGTCATCATTCATATTTTCATGGGCTCTTACAATGAACAAATCGTTAACAAAATAGGGAGTTCGTTTAATGATCTTTATAATGCCTTAATCTCTATTCCCATTAACGCTCCAGGTTTCGCTTTCCATAAAGGACTCAAGGCACGTAAGAAGCTGGTGAAATTAGTTAAACCTATTGTGGAAGAAAGGAGGAGGATGATAAAAAATGGTCAAATTGGGGACAAAAAAGATCTCATTGATATTCTTTTGGAAGTCAAAGATGATGATAGTTGGAAATTGGAGGATGAGGATATTGTTGACTTTCTGATAGGGCTTGTACTGGCTGGTCATGAAGGCTCGGCAACTGGCATGATGTGGGCAATTACATATCTTACACAGCATCCACATATGTTGAAAAAGGCCAAGGAAGAGCAGGAAGAAATCATGAAGGCAAGACTGCCCTCAGAGAAACAATTAAGTCTGAAGGAAATTAAGCAAATGGTTTATCTTTCACAGGTAATCGATGAAACGTTGCGCTGTACCAGTTTTAACTTTGCAGTTTTTCGAGAGGCAACTACTGACAAGAACATCAATGGTTATATGATACCGAAAGGATGGAAAGTGCTGGTTTGGTTAAGAGCTATTCATATGGATCCTAAATGTTATCCAAATCCAGAAGAATTTAATCCATCAAGATGGGATGACCACAATGCCAAATTAGGAACCTTCCTTCCTTTCGGAGCAGGAAGTAGGCACTGTCCTGGAAGGGACTTAGCGAGACTTCAAATTTCTGTATTTCTACATTATTTCCTCCTTAATTACAAGTTGGAGCGAATAAATCTAAAATGTCGTGTTACTAGCCTGCCATCGCCTAAGCCCACAGACAACTGTCTCGCAAGAGTGATAAAGGTCTCAGGTGCATAG 1476 0.4031 MELHCVWLFSATLLACYIFVTKFVRSLNGWYYDLKLRNKQYPLPPGDMGWPLLGYLLTFVKDFKFGDPNSFINNLLSKYGQTGIYKTHLFGNPCIIVCEPEMCKQVLLDDENFKMGYPKSTMEVTQGTTIWNYSSAEHRRFRRLVYAPIVGHNALAMYLERIEDIVVNSLEELSSMKHSVEFLEEMKKLSFKVIIHIFMGSYNEQIVNKIGSSFNDLYNALISIPINAPGFAFHKGLKARKKLVKLVKPIVEERRRMIKNGQIGDKKDLIDILLEVKDDDSWKLEDEDIVDFLIGLVLAGHEGSATGMMWAITYLTQHPHMLKKAKEEQEEIMKARLPSEKQLSLKEIKQMVYLSQVIDETLRCTSFNFAVFREATTDKNINGYMIPKGWKVLVWLRAIHMDPKCYPNPEEFNPSRWDDHNAKLGTFLPFGAGSRHCPGRDLARLQISVFLHYFLLNYKLERINLKCRVTSLPSPKPTDNCLARVIKVSGA* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00111 491 PANTHER CYTOCHROME P450 26 39 465 - -
Rops4g00111 491 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00111 491 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00111 491 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00111 491 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00111 491 Gene3D Cytochrome P450 34 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00111 491 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00111 491 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00111 491 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00111 491 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00111 491 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00111 491 Pfam Cytochrome P450 44 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00111 491 SUPERFAMILY Cytochrome P450 38 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00111 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Rops4g00111 491 CDD CYP90-like 76 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00111 Rops-Chr4 3700273 3704282 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00111 13 488 Cytochrome P450 AT2G32440 48.428 3.62e-172 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00111 K04123 K17875 ag:BAG68929 740.725