Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00100 ATGTCAAAAAACAGTCTTGAAGAGCTTCTTCAAACCGATGATTCTATTCCTGGGTGTAATCTTAGGGTGATCACAACCTTATTCAATACATATTCTCCACCTTTATCAGCTTCACCTGAGAACGGGTCTCTTTCTGTACCAGATCTCCAATTGAAGTTGAAGTCAAATGATGTTAATGTTTCTTCTGCATTTCAGAAGAAAGAATATCTTGTTGATCCATCCTTTCCAGACATCAAGAACAACATATACTCAACTGATGAATTCCAAATGTATTCTTTCAAGGTTCGACCTTGTTCACGAGCTTATTCACATGATTAG 318 0.3679 MSKNSLEELLQTDDSIPGCNLRVITTLFNTYSPPLSASPENGSLSVPDLQLKLKSNDVNVSSAFQKKEYLVDPSFPDIKNNIYSTDEFQMYSFKVRPCSRAYSHD* 106
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00100 105 PANTHER UNKEMPT FAMILY MEMBER 45 105 IPR045234 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops4g00100 Rops-Chr4 3250553 3250870 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00100 6 105 C2H2 Transcription Factor Family AT5G12850 48.039 3.36e-20 82.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00100 - - ccaj:109796653 165.236