Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00094 ATGTCCTCGATGAAGGTGGGTGCGCTGCTGAGCCGGTTCGTTGAGACCAAGGCGTCGACGGTGTCCATGCAGGTAGGGGAGCATGTGCAGTTGGCTTACACGCACCACAACGAGTCACCATGGCAGCCCAGATCATTTGCTGTTAAGGATGAGATATTCTGCTTGTTTGAGGGAGCCCTTGACAATTTGGGCAGCTTGAGGCAGCAGTATGGACTTGCCGAGTCTGCCAATGAAGTGGTTTTGGTGATCGAGGCTTATAAAGCTTTACATGACCCAGCACCCTACCCTGCTAATCATGTTGTTGGACATCTTAGTGGGAGCTTTGCTTTCGTAGTTTTTGACAAGTCCACTTCCACTCTTGTTGCAACTGATTTCTTCGAGATCAAGGCAAAAGAAGTTAAGAGCTGGCAACTATTCTGGTGTGTGGGGGGTGGTCTCTGGGCTGGGCTTATTATTGGATTTGTGACTGAATACTATACAAGCAATGCTTACAGTCCTGTACAAGATGTTGCCGATTCCCGCCGGACTGGAGCTGCAATCAATGTCATTTTTGGCCGTGCTCTGGGTTGCAAGTCCGTCATTATCCCTATTTTTGCCATTGCAATCCGCATTTCTGTCGGTTTTAGTTTCGCAGCAATGTGTGGTATCGCTGTTGCTGCCCTAGGGATGTTGAGCACCATTGCTACTAGGTTGGCTATTAACGCCTATGGGCCCATTGGTGACAATGCAGGGGGTATTGCTGAGACGGAAGGCATGGGCCATCGTATCCGTGAGAGAACTGATGCACTTGATGTTGCTGGCAACAATACTGCTGCCATTGGCAAGGGATTTGCTATTGGGTCTGCCGCATTGGTGTCTTTGGTTTTGTTTGGTGCCTTTGTCAGCCGGGCAGGAATTTCAACTGTGGATGTCTTGACTCCCAAGGTCTTCATTGGACTCATAGTTGGTGCCATGCTTCCTTACTGGTTTTCTGCCACGACCATGAAGAGTGTAGGAAGTGCAGCTTTGAAGATGGTTGAGGAGGTTCGCAGGCAGTTCAATACCATTCAGAGCACTTCGTACGTGATCACCCAGCCTCTTGTGCAGGAGGCTGCTGTTGCACTAAGGCATTAA 1113 0.4951 MSSMKVGALLSRFVETKASTVSMQVGEHVQLAYTHHNESPWQPRSFAVKDEIFCLFEGALDNLGSLRQQYGLAESANEVVLVIEAYKALHDPAPYPANHVVGHLSGSFAFVVFDKSTSTLVATDFFEIKAKEVKSWQLFWCVGGGLWAGLIIGFVTEYYTSNAYSPVQDVADSRRTGAAINVIFGRALGCKSVIIPIFAIAIRISVGFSFAAMCGIAVAALGMLSTIATRLAINAYGPIGDNAGGIAETEGMGHRIRERTDALDVAGNNTAAIGKGFAIGSAALVSLVLFGAFVSRAGISTVDVLTPKVFIGLIVGAMLPYWFSATTMKSVGSAALKMVEEVRRQFNTIQSTSYVITQPLVQEAAVALRH* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00094 370 Pfam Inorganic H+ pyrophosphatase 121 350 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Rops4g00094 370 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 16 130 IPR029055 -
Rops4g00094 370 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 28 128 IPR029055 -
Rops4g00094 370 SMART DUF3700_2 1 182 IPR024286 -
Rops4g00094 370 Pfam Aluminium induced protein 8 123 IPR024286 -
Rops4g00094 370 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 123 352 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00094 Rops-Chr4 2983967 2985212 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00094 131 349 Primary Pumps ATPases AT1G15690 87.671 9.58e-125 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00094 K23025 - gmx:100803691 370.933