Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops4g00066 | ATGGGTGGGGAGGGCACCAAGCTTTTCACTTTGGCTGAAGTCTCTCAGCACAACAATGCCAAAGATTGTTGGCTTGTAATTCATGGCAAGGTTTATAATGTGACAAAGTTCCTAGAGGACCACCCTGGTGGGGATGAGGTCCTGTTGTCTTCAACAGGGAAAGATGCATCTAATGATTTTGATGATATTGGTCACAGCACCAGTGCTGTAGCCATGATGGATGAGTTCTATGTTGGAGACATTGATACATCAACCATTCCCTCTAAGATTAAGTATACTCCTGCAAAACAACCTCACTATAATCAGGACAAGACATCAGAGTTCATCATCAGGATCCTCCAATTTCTAGTTCCCTTGTTTATCTTGGGTTTGGCAGTGGGTATTCGTTTCTACTCCAAATCAAGTTAA | 408 | 0.4265 | MGGEGTKLFTLAEVSQHNNAKDCWLVIHGKVYNVTKFLEDHPGGDEVLLSSTGKDASNDFDDIGHSTSAVAMMDEFYVGDIDTSTIPSKIKYTPAKQPHYNQDKTSEFIIRILQFLVPLFILGLAVGIRFYSKSS* | 136 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops4g00066 | 135 | PANTHER | CYTOCHROME B5 | 6 | 133 | - | - | |
| Rops4g00066 | 135 | FunFam | Cytochrome b5 type B | 3 | 86 | - | - | |
| Rops4g00066 | 135 | PRINTS | Cytochrome B5 signature | 69 | 81 | IPR001199 | - | |
| Rops4g00066 | 135 | PRINTS | Cytochrome B5 signature | 41 | 55 | IPR001199 | - | |
| Rops4g00066 | 135 | PRINTS | Cytochrome B5 signature | 56 | 63 | IPR001199 | - | |
| Rops4g00066 | 135 | PRINTS | Cytochrome B5 signature | 31 | 41 | IPR001199 | - | |
| Rops4g00066 | 135 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 37 | 44 | IPR018506 | GO:0020037 | |
| Rops4g00066 | 135 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 6 | 82 | IPR001199 | - | |
| Rops4g00066 | 135 | SMART | Cyt_b5_2 | 9 | 82 | IPR001199 | - | |
| Rops4g00066 | 135 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 10 | 81 | IPR001199 | - | |
| Rops4g00066 | 135 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 6 | 88 | IPR036400 | - | |
| Rops4g00066 | 135 | Gene3D | - | 3 | 87 | IPR036400 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Rops4g00066 | Rops-Chr4 | 2251093 | 2253450 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Rops4g00066 | 1 | 134 | NADPH P450 reductases | AT5G48810 | 66.176 | 2.89e-67 | 198 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Rops4g00066 | K23490 | - | gmx:100500611 | 261.151 |