Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00029 ATGACAATGGATGCCCATCACTGCCTCCCTTCATCAAACGATGTCATCCTCAACATCCACTCTGCTCACAACATCATCGGGAAGAAGAAAAGGGATACTTTGTTTCTTGCATACAGGACTCTTGGTGTTGTATTTGGAGGTTTAGTAGCATCACCCCTTTATGTGTACCTTTCAATGCCACTTAAGTCTCCAACAGAAGAGGACTATTTGGGCATTTATAGCATCATGTTTCAGACTCTTACTCTTATTGGGGTTGTTAAGTATGCCAACATAGCCATTAAAGTTGATGACCATGGTGAAGGTGGGACTTTTGCCCTGTATTCACTACTTTGTAGGCACTTTAATACTGCCTTCTAA 357 0.4174 MTMDAHHCLPSSNDVILNIHSAHNIIGKKKRDTLFLAYRTLGVVFGGLVASPLYVYLSMPLKSPTEEDYLGIYSIMFQTLTLIGVVKYANIAIKVDDHGEGGTFALYSLLCRHFNTAF* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00029 118 Pfam K+ potassium transporter 38 112 IPR003855 GO:0015079|GO:0016020|GO:0071805
Rops4g00029 118 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 29 115 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00029 Rops-Chr4 798272 798628 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00029 21 113 Inorganic Solute Cotransporters AT5G14880 54.082 8.06e-25 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00029 K03549 - gmx:100783944 160.229