Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02824 ATGCCATCTTTGCACTTCCATTGTTGGGTGCTGCCCTTCAAACCCTCACCCATTTCTTCTTCTTCTTCTTCTGGGTCTCCTCTTTCATTTTCTGTGGCAGCTTCTTTCATCTCAAAAACACAAACAAACACTGCTCAAAGAAAAGAAGCAGAAGAAGCCCCTGCACTGTCACAAAATTTTTCCTGCACTAATCGGTTGCAATTTGTTTCTGGGAAGATCTGGTTGATCCGAACCGGTGAACAATCTGGGTGGTTGAATCAACGAGTTGTGGAGAAACTATATTGGGATCTAGTGTCTGAATCGTTGGTTCTATTGATGGAGACGCTTGTTGTTGTACAACATAGGAACCAATACTACAGCAGGTCTAAGTCACAAGGCCATGCTCGGTTTGGTTTTTCTTCACCTTCCAGAGATTTTAGAGGTATCAATTGTAGAACTTTCCAAACGAGTTCTGGTATTCTACCAACTCCATTGAGATCTTATGGTTCACCTGTAACTAAAGGGTCATCTTCAGTTTCCTCTAAAACACCTTTAACCACTCCAAACTCAAACTCAGATAACAAGACCCGTAGCAAAACTGCTCCTTTTAGCACCCCGGTTCCAATCAATGACAAAGCTTGTGAAAAGGAGAGAACTTTCATGGAAAATGTCCCTTTTGGGAGCCTTTCGCTCTACGAGCGTTGGGCGGGACCTACCTACTCAAATTCACCACCACCAAGTTCATTGCCTATTCCAAAATTCTCTGTTCGACCAAAGAGGACCGTGTCGCTTGAATTGCACATAGTGGTGGTGCCCTTTGATGGTTGTGGTGGGTCGACAATCTCCAGATATTGGACATTGGATCAAGCTTTGGAGAGGGTAAATGGGTGTATATGTAAGGATGGATTTTATGGGAGCAGGTTTTGCCATGTGACTTGGATGGAAGCTGCCGGGAAGATGGTTGGGAAGCACAATGATGGTAACGGTTTGGAGTGGAATGAAATAGACTTGGTTGACTGTGCTCAAAAGGAGACCTCTGCAGAACCCGTTGATCTGGAGATTACAGGAAGCCTGAAAGATGCTCAAGCTTTTGCTCTCCAGAATGCTCTTTTTGGTCAGGGTCTCATTGCTAATTGGTTTAGGCGGGGACCTCTCATTAAGGCAACATGCCTCAGGACAAAGCCATATACTCTCTTCATATTAATCTTGCTGGCTGTCTTTATACACTTCATACGAATGTCAAGATCTACTCCACAAGAATATGAGACAAGTAAGGAAATCCGCGCACGTCCTCCACCAATTATTTCTGGCCCAGTTCGTGCGACAGACAGGGGTGGCATCAGGTTCACCATCAATGGTCATTCCTACTTCAACTTGGCCCTCATTACTAATGGTGGGGGTGCTGGTGATACCCATTGTGGGCACGTTCTGCATGTGCCATGCAGGAACAAGGAAATTCTCTTCAACACGATGAAGCAGCCAGCCTTTCCAAACGTTTTGCCATGTTCCTCTCATGCATGCGAGAGCCATGGGGTACTGCTGGTGTTACCAGGAAAGCTAACAAAGAGATCTTGGAACATCACTCATGCTCCCACGTCCTCCACATCACCACGACCACCATCAGCACCCATGCACTAG 1617 0.457 MPSLHFHCWVLPFKPSPISSSSSSGSPLSFSVAASFISKTQTNTAQRKEAEEAPALSQNFSCTNRLQFVSGKIWLIRTGEQSGWLNQRVVEKLYWDLVSESLVLLMETLVVVQHRNQYYSRSKSQGHARFGFSSPSRDFRGINCRTFQTSSGILPTPLRSYGSPVTKGSSSVSSKTPLTTPNSNSDNKTRSKTAPFSTPVPINDKACEKERTFMENVPFGSLSLYERWAGPTYSNSPPPSSLPIPKFSVRPKRTVSLELHIVVVPFDGCGGSTISRYWTLDQALERVNGCICKDGFYGSRFCHVTWMEAAGKMVGKHNDGNGLEWNEIDLVDCAQKETSAEPVDLEITGSLKDAQAFALQNALFGQGLIANWFRRGPLIKATCLRTKPYTLFILILLAVFIHFIRMSRSTPQEYETSKEIRARPPPIISGPVRATDRGGIRFTINGHSYFNLALITNGGGAGDTHCGHVLHVPCRNKEILFNTMKQPAFPNVLPCSSHACESHGVLLVLPGKLTKRSWNITHAPTSSTSPRPPSAPMH* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02824 538 MobiDBLite consensus disorder prediction 158 201 - -
Rops3g02824 538 PANTHER BNAA03G57290D PROTEIN 106 260 - -
Rops3g02824 538 PRINTS Expansin signature 438 450 IPR002963 GO:0009664
Rops3g02824 538 PRINTS Expansin signature 450 471 IPR002963 GO:0009664
Rops3g02824 538 Pfam Proline-rich nuclear receptor coactivator motif 228 247 - -
Rops3g02824 538 MobiDBLite consensus disorder prediction 158 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02824 Rops-Chr3 59722863 59725049 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02824 414 469 Expansin Gene Family AT1G69530 55.357 5.83e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02824 - - zju:107425967 186.808