Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02819 ATGATACCCACCAGCCAACTCATGACCATGCCTTTATTTCTGATCATCTTCTTCCTAAAGATAGCCTTGGTGGCATCATCCTCATCGGATCTCCGACCTGGTTTTTACTCGAATTCATGTCCAAAAGCTGAATTCATAGTCCGAAATGTCATGAAGAGGGCCCTCATAAGGGAACCCAGAAGTGTTGCCTCTGTTATGCGCTTCCAATTCCACGATTGCTTTGTCAACGGATGTGATGCTTCTATGTTGCTGGATGACACACCAACTATGCTTGGGGAGAAATTAGCACTCTCGAATATAAATTCGCTTAGATCATTTGAAGTTATTGATGAAGTTAAGGAGGCTCTAGAGAAATCGTGCCCAGGAGTTGTTTCTTGTGCAGATATCATAATCATGGCTGCTAGAGACGCTGTAACACTGACAGGAGGACCCAACTGGGAGGTGAGGTTGGGAAGATTGGACAGTTTGACTGCTAGTCAAGAAGACTCAAACAATATAATGCCCAGTCCAAGAGCCAATGCAAGCTCCCTTATTGACCTCTTCCAGAAATTTAACCTTAGTGTGAAAGACCTTGTAGCACTCTCAGGATCCCACTCTGTTGGTCAAGCTCGTTGTTTTTCCATCATGTTTAGGCTATACAATCAATCTGGAAGTGGAAAACCTGACCCTGCCATTGATCCCAAGTTCAGAGAAGACCTTAACAAGCTATGTCCACCAGATGTTGACCAAAATGTGACTGGGAACCTTGATTGCACACCTCTGGTGTTTGATAACCAATATTTCAGGGACTTAGTTGCTGGGAGAGGCTTTCTTAACTCTGATCAAACACTTTTCACTTCCCCCCAGACGAGGGAATTAGTGAAGTTATATAGTAGAGATCAAGTTGGATTTTTCAAAGCATTTGTGGAAGGGATGTTGAAAATGGGTGACTTACAGTCTGGTCGACCCGGGGAGGTTAGGAGGAACTGCAGAGTGGTCAATGCTGGCCAGGTTCATTTGCTGTTTGAGTCTCAACGCAAGACGGAGGGTCACCGCATATTAAAATAG 1047 0.4441 MIPTSQLMTMPLFLIIFFLKIALVASSSSDLRPGFYSNSCPKAEFIVRNVMKRALIREPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLALSNINSLRSFEVIDEVKEALEKSCPGVVSCADIIIMAARDAVTLTGGPNWEVRLGRLDSLTASQEDSNNIMPSPRANASSLIDLFQKFNLSVKDLVALSGSHSVGQARCFSIMFRLYNQSGSGKPDPAIDPKFREDLNKLCPPDVDQNVTGNLDCTPLVFDNQYFRDLVAGRGFLNSDQTLFTSPQTRELVKLYSRDQVGFFKAFVEGMLKMGDLQSGRPGEVRRNCRVVNAGQVHLLFESQRKTEGHRILK* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02819 348 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g02819 348 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g02819 348 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g02819 348 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g02819 348 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g02819 348 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g02819 348 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g02819 348 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g02819 348 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g02819 348 PANTHER PEROXIDASE 72-RELATED 28 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g02819 348 FunFam Peroxidase 34 177 - -
Rops3g02819 348 Gene3D - 34 327 - -
Rops3g02819 348 Pfam Peroxidase 47 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g02819 348 Gene3D Peroxidase, domain 2 168 308 - -
Rops3g02819 348 SUPERFAMILY Heme-dependent peroxidases 31 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops3g02819 348 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Rops3g02819 348 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g02819 348 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g02819 348 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g02819 348 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g02819 348 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g02819 348 ProSiteProfiles Plant heme peroxidase family profile. 30 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g02819 348 FunFam Peroxidase 168 308 - -
Rops3g02819 348 CDD secretory_peroxidase 31 326 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02819 Rops-Chr3 59605183 59608959 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02819 15 337 Peroxidase AT2G22420 72.446 0.0 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02819 K00430 - gmx:100796737 545.428