Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02794 ATGGATGCCACTGGTAACATGTTTTGTAATAATGATGATCTTGTTAACCCTCTAAGCTCAATGGGCATGCAAGTGTCATGCATTCTTGTTGTATCACACTTCTTCAATGTTCTTCTTAGAACTATTGGTCAACCTGGACCCATTGCACAAATTCTGGCTGGGTTGGTACTAGGTCCAATGTCTCATATTCAATCTATTAAAAAAATATTCTTCCCTGCAAGTTCCATAAATTACTATGAAGTTGTGAGCTTCTTCTGTCGCATTCATTTTATGTTCTTGTTTGGGTTAGAGATGAATCTTCACTTCACCAGGCGAAATCTACGTCTAGTCAGCTTGGTAGCCTGTGGTGGTGCACTAATGGGTGCTATCTTTGGCATATCTGTGTCCTTTTATTTGTATCAAGAGTTCAATTTCAAAGCCTCCAAGCATTATTTTGTTATGATCATTATGCTAGTGGTGTCATACACAAGCTCCCCTATGGTGATTCGTTTGGCAGCAGAATTGAGGTTTGCTGCATCAGATGTCGGGCGAATCGCGGTGTCTGCTGCACTGATTACAGAAACGGGTTGCTTGTTGTTCTTTAATGTGATGGTTAACTGGACAAAAGAACTTCACTTTCTTACTGCTATTGGTTGCGTTTTGATTACTGCCACCGTGTGTTATATAAACATGTACTTAGCTGCTTGGTTAAATACAAGAAATAGAAACCAAAAGTACCTCAAGGCTCCTGAGCTGTTACTCATCCTATTCCTGCTTCTAGTTAGCTCAATGACTGTAGAAATTTTTGGTTACAATAGTATCATTAATTGCTTTTTCATTGGCTTGTTCTTTCCTAAGGAAGGCAAAACTGCTAGAACATTGCTGCATAAACTTAGTTATTCTATTTACAACTTTGTACTTCCAGTGTATTTTGGGTACTTGGGGTTACAATGTGACCTAATAACCGTCTTCCAGAGCTTGAATAAGACAACCTATACAGTCATATTGATTTTGTTGAGCATTGGTAGCAAGCTTGGTGGTACTCTTATAGTTTGCCGTTATCTTCAAATTCCAACAAGTGAAGGGATTTTTCTTGGCTTCATAATGAACACTAGAGGTTATTCTGATCTGCTATTCTTTGGGGCAGCTTCAAAGCAAGTAATTACTTTTAATACAGATGCTTACAATGTGTTGCTGGTATCAATAGTAATTAACACAATAATATCAGGAATAATTGTGGCTTTTCTAGCAAGGGGGGAAGAGAAGATGTTTGCAAACAACCATACTGCAATTGAACCACAGAAATTGGAGGATGAGCTTCGAATTTTGGCTTGTGTATATGATCCTCGTCAAGTATCTGCCATACTTGCCACAGTGCTAGCAATGCATGGCTCTACAGAATCACCATCTACCATTTATTTAATGCACCTAATAGAGCTTGTGAAGAAGATCAAGTCTAACTTGTTATACCATGAAAAGGAAAATGCTGACCTTAGTGATGATGAAGACTATGGTGGCAATGATGTTGTGGAAATTAACAACGCTTTAGATGCCTTCACTGCAGACACAAAGATCTTGGTCCACCAAAGAAGGGCAGTGTCTTCTTTTCCAAGTTTGTATGAAGATGTTTGCAATGAAGCAGAAGATCTTCAAGTATCCATCATTCTACTTCCCTTCCACAAGCATCAACGCATTGATGGGAAATTGGAAAGTGGGAAGGAAGGTATAAGGATTACTAATCAGAAGGTTCTCAGACATGCTCCTTGTTCTGTTGGTATCGTTGTAGAAAGAGGACTTGCAAGGGTCCCTGGTTTCTCACAACTAGTTGCATCTGAAGCCATTCAAAATGTTGCAACACTTTTCTTTGGAGGCCCTGATGATCGTGAAGCCATTGCTTGGAGCCTACGCATTTCGAGAAGCTCTCGGATTAACTTGACAATCATAAGGTTTCTATTGGCTTCTCCTTCATCACAGGATGAACATACTGAAAGTGGACAATCTGAGGACAAAGAAATTTTGATGTCCTTGTCTGGGGAAGAGACTGTGAATGAGATTGACAACACCTTTATGGTTGATTTTTATAATAGGTATGTGACTTCTGGTCAAATTGGATATGTGGAAAAGTTTGTGAAGGATGGAGCACAAACAGTGGAATCTTTGAAAGAGATGGGGGACATGTACTCTTTGTTTGTAGTAGGAAAAGGTGGTAGAGGAAATAGTTCATTAACCATTGGTATGAGTGATTGGGAGGAGTGTCCAGAACTTGGAACAGTTGGTGATGTCTTGGCTTCTTCAGACTTTGATATTCATGGCTCAGTTTTGGTCATTCAACAGCATAGAGATGCCAAGAAAGGCCTAATGCATGATTAG 2349 0.3946 MDATGNMFCNNDDLVNPLSSMGMQVSCILVVSHFFNVLLRTIGQPGPIAQILAGLVLGPMSHIQSIKKIFFPASSINYYEVVSFFCRIHFMFLFGLEMNLHFTRRNLRLVSLVACGGALMGAIFGISVSFYLYQEFNFKASKHYFVMIIMLVVSYTSSPMVIRLAAELRFAASDVGRIAVSAALITETGCLLFFNVMVNWTKELHFLTAIGCVLITATVCYINMYLAAWLNTRNRNQKYLKAPELLLILFLLLVSSMTVEIFGYNSIINCFFIGLFFPKEGKTARTLLHKLSYSIYNFVLPVYFGYLGLQCDLITVFQSLNKTTYTVILILLSIGSKLGGTLIVCRYLQIPTSEGIFLGFIMNTRGYSDLLFFGAASKQVITFNTDAYNVLLVSIVINTIISGIIVAFLARGEEKMFANNHTAIEPQKLEDELRILACVYDPRQVSAILATVLAMHGSTESPSTIYLMHLIELVKKIKSNLLYHEKENADLSDDEDYGGNDVVEINNALDAFTADTKILVHQRRAVSSFPSLYEDVCNEAEDLQVSIILLPFHKHQRIDGKLESGKEGIRITNQKVLRHAPCSVGIVVERGLARVPGFSQLVASEAIQNVATLFFGGPDDREAIAWSLRISRSSRINLTIIRFLLASPSSQDEHTESGQSEDKEILMSLSGEETVNEIDNTFMVDFYNRYVTSGQIGYVEKFVKDGAQTVESLKEMGDMYSLFVVGKGGRGNSSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLVIQQHRDAKKGLMHD* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02794 782 Gene3D - 20 418 IPR038770 -
Rops3g02794 782 PANTHER CATION/H + ANTIPORTER 15 773 - -
Rops3g02794 782 Pfam Sodium/hydrogen exchanger family 28 410 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02794 Rops-Chr3 59228292 59230845 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02794 12 782 Antiporter Super Family AT1G79400 39.615 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02794 K26731 - gmx:100804522 1278.85