Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02792 ATGGGGATAGAGCTAGGGCACTCAGAGTTCAATTCAAAGGAAGAAGCTTTCTCATATTACAAAGAGTATGCCAAATCCGTTGGGTTCTCTGCCATAATCAAAGCTAGTCGTCGATCTCGAATTTCTGGCAACTTCATTGATGCTAAATTTGCATGCACCAGATATGGAATCAACAACAACAACAACAATAACCCTAATTCTCTTTCAACCAATACCATGATGCCCTTACCCCTAAAAAGGAAAAGGGGTAGAGTGAAACCCTCTTGGCCCAAAACAGATTGCAAGGCCTGCATGCATGTCAAGAGAAGAAAGGAAGATGGTAGATGGGTTATCTCCACTTTCATCAAAGACCATAACCATGAAATTTCCCCTGACCCTAACCTTAGAAATAATAATAATAATAATTCTGATGTATTAGGTGCTGTCAAAGTGTCAGGGAAAAAATCTGGTGGGGGGTGTAACAAAGTTGAGAAGAATCAAGGAAAAAATCAGCATTTGGGTTTTCATGAAGGTGATCTTAAAGCTTTGCTTGACCATTTTATGCGTATGCAAGATGAGAATCCTAACTTCTTTTATGCAATTGATTTCAATGAGGAGCAACAATTGAGAGGTGTTTTTTTGGTTGATGCCAAAGCTAGGCTTGACTATAGACACTTCAGTGATGTGGTTCTTTTGGACACCACTCATGTAAAGAATGAATATAAGTTGCCATTTATTCCTTTTATTGGTGTGAACCATCACTTTCAGTTCATGTTGCTAGGGTTAGCTTTGGTTTTTGATGAGTGTAAATCCACATATGCTTGGCTGATGCAGGCTTGGCTCAAGGCAATGGGTGGATTTGCTCCCAAGGTGATACTCACAGACAGAGACATGACTCTGAAAGAAGCTGTTGCTCAAGTGCTTCCGGATTCTTGTCATTGTTTTTGTTTGTGGCATGTGATGAGTAAAGTTCATGAAAAGCTCAGTTATGTAACACTGATGCATGCTAACTTTATGACCAAATTTAACAAATGTGTGATCAAGTCAAGGACAAGGGAACAATTTGAGAAGAGATGGTGGAAAATGGTTGAGAGATTCAATTTAGGTGATGATGATTGGTTATGCTCAATTTATGAGGACCGTGAACAATGGATCCCGGCGTATATGAAAGGGAAGTTTTTAGCTGGTATGTCTACTATGCAAAGATCAGAAACTTTGAACTGTTTGTTGGACAAATATATACAGAGGAAAACCACATTGAAAGAGTTTTTGGAGCAATACAAAGTGATATTGCGAGATAAATGCGAAGAGGAAGCAAAAGCAGATCTTGAAACGTTGCATAAACAACCAGCATTAAAATCACCATCACCTTTTGGTAAACAGATGGTAAAAGTATACACAAATGCAATATTTAAGAAATTCCAGAGTGAGGTTGTGGGAGTTGTTGCCTGTCATCCAAGTAAAGAAAGTGAAGATGGACCAACAAAAATGTTTAGGGTTCAAGATTTTGAAGACAATCAATATTTTGTTGTCATGTGGAATGAATTGACCTCTGAAACATCATGTTCCTGCTATTCATTTGAATTTAATGGCTTTCTTTGTAGACATGTAATGATTGTGCTACAAATTTCTGGTGTACATAACATTCCTTCTCAGTATATATTAAAACGTTGGACGAAAGATGCTAAGAATAGACAAACAGCAAGAGATCTGTCAGATGTGGTTGACTCTAAGGCTAAGCGCTATCATAATTTATCTCAACAAGCTTTTGATCTGGGTGATGAAGGTTCTTTATCACAAGAGAGTTACATTGTTGCAGTAAATGCATTGGAAGAAGCTTTGAAAAAATGTGAGAGCCTGAATGATTCAGTTCAGAGTGTTATAGAACCAAACTTGCCAACTTTTGGTTCTCAAGAGGTGAATCTGAGCAACAGTGCTGGTCATACAAACAAAAGGAATAGTACTTTTAAGAAAAGACAGGAAAACCCCAATACTCGAGCAGCTGTCCTTGATTGTGTGTATGAATCACATCAGAGCATTCAAAAGATGGACCAGCTGAATTCAAGAGCTCAGAACCTGGAGGGGCATTTTGCTACTCAACAGTCAGGAATGTGCCAATTGAACTCGATAGCTGCAGTTGGTAATGATTATAACAGCAACCAGCATGGCATCCTAGGCCTGGTACAGTTGAACTCGATTGCGCCTAATAGTGATGCCCATTACATGGTCCCACAAAGGATGCATGGGATGGCACGGTTACATTTCATACAACAAGCAGCATCAAGTTGTTTTGATTTTCAAGATAGTTCACAAAATATGGACCATCCCAATGGAGGATCCACACAACTGCATGGGATGGGAGTAAACGCAAGACAACTAAATTCAAGGCACCAATCTCAGTAG 2382 0.3904 MGIELGHSEFNSKEEAFSYYKEYAKSVGFSAIIKASRRSRISGNFIDAKFACTRYGINNNNNNNPNSLSTNTMMPLPLKRKRGRVKPSWPKTDCKACMHVKRRKEDGRWVISTFIKDHNHEISPDPNLRNNNNNNSDVLGAVKVSGKKSGGGCNKVEKNQGKNQHLGFHEGDLKALLDHFMRMQDENPNFFYAIDFNEEQQLRGVFLVDAKARLDYRHFSDVVLLDTTHVKNEYKLPFIPFIGVNHHFQFMLLGLALVFDECKSTYAWLMQAWLKAMGGFAPKVILTDRDMTLKEAVAQVLPDSCHCFCLWHVMSKVHEKLSYVTLMHANFMTKFNKCVIKSRTREQFEKRWWKMVERFNLGDDDWLCSIYEDREQWIPAYMKGKFLAGMSTMQRSETLNCLLDKYIQRKTTLKEFLEQYKVILRDKCEEEAKADLETLHKQPALKSPSPFGKQMVKVYTNAIFKKFQSEVVGVVACHPSKESEDGPTKMFRVQDFEDNQYFVVMWNELTSETSCSCYSFEFNGFLCRHVMIVLQISGVHNIPSQYILKRWTKDAKNRQTARDLSDVVDSKAKRYHNLSQQAFDLGDEGSLSQESYIVAVNALEEALKKCESLNDSVQSVIEPNLPTFGSQEVNLSNSAGHTNKRNSTFKKRQENPNTRAAVLDCVYESHQSIQKMDQLNSRAQNLEGHFATQQSGMCQLNSIAAVGNDYNSNQHGILGLVQLNSIAPNSDAHYMVPQRMHGMARLHFIQQAASSCFDFQDSSQNMDHPNGGSTQLHGMGVNARQLNSRHQSQ* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02792 793 SMART 26again6 513 540 IPR006564 GO:0008270
Rops3g02792 793 MobiDBLite consensus disorder prediction 631 655 - -
Rops3g02792 793 ProSiteProfiles WRKY domain profile. 77 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops3g02792 793 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 611 IPR031052 GO:0006355
Rops3g02792 793 Pfam MULE transposase domain 222 315 IPR018289 -
Rops3g02792 793 Pfam FAR1 DNA-binding domain 18 123 IPR004330 -
Rops3g02792 793 Pfam SWIM zinc finger 501 534 IPR007527 GO:0008270
Rops3g02792 793 ProSiteProfiles Zinc finger SWIM-type profile. 501 538 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02792 Rops-Chr3 59224112 59227775 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops3g02792 FAR1 2.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02792 - - aprc:113869938 1026.16