Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02791 ATGCTTGCGGAGGATGGATTTAAAGATGATTCCCTGAAGATAATGCAAAAAATAGGACAATTCAATTCTAACTGTCAGGTTCTTCTGTTTTCTGCTACATTCAATGACTCTGTCAAGGATTTTGTTTCAAAGACAGTTAAGAAGGATCATATTAAACTTTTTGTGAAGAAAGAAGAATTATCTTTAGATGCAGTGAAGCAATATAAAGTGCATTGTCCTGATGAACTCTCTAAGGTCGAAGTGATAAAAGATTATATACTGGAACATGGACAGAATGTGGGGCAAACTATTATATTTGTGCGCACAAGAAACAGTGCGAAAGTTTTGCACCAAGCACTTGTTGCTATGGGCTATGAGGTTACTTCCATACAAGGTGCTCTCAACCATGAAGAGAGAGACAAGATTGTCAAGGAGTTCAAAGCTTGTTTGTCTCACATTCTTATATCAACTGATATTCTTGCCCGTGGCTTTGATCAAGAGACGGTTAATTTGGTTGTCAACTATGATCTTCCAGTGAAATACAACACTGAGTATACCCGTGAAAGGGAGCCGGATTATGATGTGTATTTACACAGGGTTGGTAGGGCTGGGCGTTTCGGGCACAAAGGAGCTGTATTTAACCTGATATGTGATGAAAGGGATGAAAAGTTCATGTCGAAGATTGAGAATCATTTTGGCATCCACATAACTGAGGTGCAAGAAAAGAATGTTGAAGACTTTAAAGGTGCTCTTAAGAAAGCTGGTTTACTGCAATGA 756 0.3862 MLAEDGFKDDSLKIMQKIGQFNSNCQVLLFSATFNDSVKDFVSKTVKKDHIKLFVKKEELSLDAVKQYKVHCPDELSKVEVIKDYILEHGQNVGQTIIFVRTRNSAKVLHQALVAMGYEVTSIQGALNHEERDKIVKEFKACLSHILISTDILARGFDQETVNLVVNYDLPVKYNTEYTREREPDYDVYLHRVGRAGRFGHKGAVFNLICDERDEKFMSKIENHFGIHITEVQEKNVEDFKGALKKAGLLQ* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02791 251 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 81 248 IPR001650 -
Rops3g02791 251 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 4 221 - -
Rops3g02791 251 CDD SF2_C_DEAD 65 209 - -
Rops3g02791 251 Gene3D - 1 60 IPR027417 -
Rops3g02791 251 Gene3D - 61 248 IPR027417 -
Rops3g02791 251 SMART helicmild6 107 200 IPR001650 -
Rops3g02791 251 Pfam Helicase conserved C-terminal domain 78 200 IPR001650 -
Rops3g02791 251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 218 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02791 Rops-Chr3 59220308 59222998 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02791 6 240 Eukaryotic Initiation Factors Gene Family AT1G72730 34.468 4.17e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02791 K18655 - gmx:100784739 369.007