Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02781 ATGGATTACGAACCTTACGATAGTAGCGGAACTGATGATGATCTCCCGCCAACACATCAAAATAGAATTCCCAGGGGAGGAGGACGTCTTGCTGGGAATGGAAGATCAGCGGTTGGTTCAATTCCATACCCCAGGATGTATGGTGAAATTGATATGGAAACCCAAATTCATCAACTTGAGCAGGAAGCATACAGTTCAGTTCTGAGAGCCTTTAAAGCTCAAGCTGATGCCATTACTTGGGAGAAAGAAAGTTTGATTACAGAGCTGAGAAAAGAACTTAGATTATCAAATGAGGAACACAGAGAACTTCTTGGTCGGGTTAATGCAGATGACATGATACGGAGGATAAGGGAATGGAGACAGGCAGGTGGCCATCAGCCTGGCGTACTGAGTACTGGTCAAGCTCTTCATGATTCAATTCCCAGTCCGACAGTCTCTGCATCTCGCAAAAAGCAGAAGATTACACCATCTGTACCATCACGTTCTTTTGGTGGGCCTTCTCCTCCATTTCACCCCCAAACAGTCACTGCACCCCACCAGCCATCTTCTTCTGCTGCAAAACGAGGATCTGTTCCTGGATCAAAGGGAAAGAAACAGAAACCTGGTCAAATATTACCTGGTGTATCTTCAATGAAGCAGTATCCGTCCTCAGGACCAGGTGGAAGGAATCAAGTACCTAATAGAGCTGTCATGGGTGAGCTTGCTGAGGGAGCATCATTTGATTCATTGATTGGTAGGAGAGTACGGACAAGATGGCCTGATGACAATAACTTCTATGAAGCTGTTATTGCTGACTACAATCCAGCTGATGGACGACATAATCTGGTCTATGACATGGGGAGTGCAAATGAAACATGGGAATGGGTTAATCTGTCAGAGATATCTCCTGAAGATATTCAGTGGGTCGGTGAAGATCCTGGAATCAATCATCGTGGGGGTTTTGGAGGCTCTGGTCATGGGATGAATCGGTCCGTAGGGCGTGATAGTGTTCCAGGAACCGGAAGAGGTAGAGGAGTTACAAAGGGGCAATCCAGAAAAGATTTTTTATCATCACAAAATGGCATAGGAAAGAAGGCTCCTGATGATATACAAATACTTCACACCGACACTCTAATCAAGGAGGTTGAGAGAGTATTCAGTGCAAATCATCCTGATCCCATTGAAATTGAGAAAGCCAAGAAAGTATTGAAGGATCATGAGCAGGCTCTTATTGATGCTATTGCAAGACTTGCTGATCTTTCTGATGGTGAAAGTGATGGGGCTGGTCACCATTTCTCACATGCTCAATCAATGGATCGAGAATGA 1305 0.4483 MDYEPYDSSGTDDDLPPTHQNRIPRGGGRLAGNGRSAVGSIPYPRMYGEIDMETQIHQLEQEAYSSVLRAFKAQADAITWEKESLITELRKELRLSNEEHRELLGRVNADDMIRRIREWRQAGGHQPGVLSTGQALHDSIPSPTVSASRKKQKITPSVPSRSFGGPSPPFHPQTVTAPHQPSSSAAKRGSVPGSKGKKQKPGQILPGVSSMKQYPSSGPGGRNQVPNRAVMGELAEGASFDSLIGRRVRTRWPDDNNFYEAVIADYNPADGRHNLVYDMGSANETWEWVNLSEISPEDIQWVGEDPGINHRGGFGGSGHGMNRSVGRDSVPGTGRGRGVTKGQSRKDFLSSQNGIGKKAPDDIQILHTDTLIKEVERVFSANHPDPIEIEKAKKVLKDHEQALIDAIARLADLSDGESDGAGHHFSHAQSMDRE* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02781 434 MobiDBLite consensus disorder prediction 1 37 - -
Rops3g02781 434 PANTHER PROTEIN EMSY-LIKE 4 11 419 IPR033485 GO:0050832
Rops3g02781 434 MobiDBLite consensus disorder prediction 415 434 - -
Rops3g02781 434 SUPERFAMILY Tudor/PWWP/MBT 242 282 - -
Rops3g02781 434 Gene3D ENT domain 47 158 IPR036142 -
Rops3g02781 434 MobiDBLite consensus disorder prediction 124 226 - -
Rops3g02781 434 Gene3D - 241 296 - -
Rops3g02781 434 MobiDBLite consensus disorder prediction 209 223 - -
Rops3g02781 434 FunFam Protein EMSY-LIKE 3 isoform A 47 177 - -
Rops3g02781 434 MobiDBLite consensus disorder prediction 416 434 - -
Rops3g02781 434 Pfam ENT domain 54 122 IPR005491 -
Rops3g02781 434 Coils Coil 389 409 - -
Rops3g02781 434 SUPERFAMILY ENT-like 47 163 IPR036142 -
Rops3g02781 434 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 52 139 IPR005491 -
Rops3g02781 434 SMART ENT_2 52 125 IPR005491 -
Rops3g02781 434 MobiDBLite consensus disorder prediction 313 361 - -
Rops3g02781 434 Coils Coil 86 106 - -
Rops3g02781 434 CDD Tudor_Agenet_AtEML-like 244 294 - -
Rops3g02781 434 MobiDBLite consensus disorder prediction 132 161 - -
Rops3g02781 434 FunFam Protein EMSY-LIKE 3 242 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02781 Rops-Chr3 59094824 59103512 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02781 - - gmx:100791651 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02781 3 59094824 59103512 Rops3g02781 3 59094824 59103512 ECH