Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02772 ATGGCAAAGTGCAAGAATAATGCCAAGAGGTTGTCTTACATCTCAGTTCCTTCTCAGATCATTAACTCCATCTCATCTTCTTCTCTTCAATCTCTGCTTGAATCTCCCAAGAAGTCTGCAAGAGTCTCCAAGTTCTTTAGCTTCAACAAGTGGAGGAACCCAAGACTCTTCTTTTTCACTCTCTTTCTTGTTGCTTTCTTTGGCATGTTCAAGCTTGGTTTCAATCTAGACATCCCATTTTCTCCCTACCCATGTGCCACAATGCCACAAGAGTTCTCAATCTCAAATGGGCATTCAAAATCTGAACTTGGGGTTGCTTCATCACAGAAAGACGAGGTTTTGAATTTGAATGCTGCCACTTTGTCGCAGCCTTTGATCACCAATGTGCAATTGCAAGCAAAGGGGCCTAGTGGAGTGGAGAAGGTGGATCAGGAAAATGATGAGGTAGTTGAAAAGAGTGAGTTTTGGAAGCAACCAGATGGGTTGGGGTACAAGCCTTGCTTGGATTTCAGCAGGGATTATAGGAGAGCAAGTGAAGGGGTTGTGAAGAATAGGAGAAAGTACCTCATGGTAGTGGTTTCTGGAGGGATGAATCAGCAGAGGAATCAGATTGTAGATGCTGTTGTCATTGCTAGGATACTTGGGGCTGCTTTGGTTGTCCCTGTATTGCAAGTCAATGTCATTTGGGGAGATGAAAGTGAATTTGCTGATATATTTGATTTGGAGCACTTCAAGAGTGTTCTTGCCAATGATGTGCGAGTGGTTTCAGCATTGCCATCAACACACTTGATGACAAGGCCAGTGGAGGGAAGCCCTCCCCTTCATGTCACTCCTAGTTGGATCCGTGCACGCTATCTAAAGAGACTCAAAAGAGAAGGCGTTTTGCTTTTACGTGGCTTGGATTCAAGGCTGTCAAAGGATCTTCCTTCTGATCTTCAGAAGCTTAGATGCAAGGTTGCTTTTAGTGCATTAAGGTTTGCAAAGCCAGTTCAGGAACTTGGTAACAAGATTTCTGAGAGAATGAATAGCAAGGGACCCTACATTGCTCTTCATTTAAGAATGGAAAAGGATGTGTGGGTGAGGACTGGTTGTCTGCCTGGTCTGAGTCCTGAGTATGATGAGATTATAAACAATGAGAGGATACAACGGCCAGAACTCTTGACAGCAAGATCAAATATAACTTACCATGAAAGGAAGCTTGCTGGCCTATGCCCTTTGAATGCTATGGAGGTTACCAGGCTGCTTAAAGCTCTTGGAGCTCCGAGAAATTCAAGAATTTATTGGGCTGGAGGACAACCATTGGGTGGAAAAGAGGCCTTGCAACCATTAATCCATGAGTTTCCACATCTTTACAGTAAGGAAGATCTTGCCTTGCCTGGAGAACTAGAACCATTTGCAAAGAAAGCTTCTCTAATGGCTGCCATAGATTATATAGTCTCTGAAAAGAGTGATGTTTTCATGCCATCTCATGGAGGAAATATGGGCCATGCAATTCAGGGTCAGAGGGCCTATGCAGGGCACAAGAAATATATAACCCCAAACAAAAGACAGATGCTCCCCTATTTTATGAATTCTTCTCTCCCTGAAGCACAATTCAACAAGATTATCAAGGAATTGCACCAGAATTCATTAGGGCAGCCAGAGCTCAGGACTAGCAAGGCTGGGAAGGATGTCACCAAGTATCCTGTCTCTGAGTGCATGTGCAATGACTCACATTATCATTCCTAG 1728 0.4375 MAKCKNNAKRLSYISVPSQIINSISSSSLQSLLESPKKSARVSKFFSFNKWRNPRLFFFTLFLVAFFGMFKLGFNLDIPFSPYPCATMPQEFSISNGHSKSELGVASSQKDEVLNLNAATLSQPLITNVQLQAKGPSGVEKVDQENDEVVEKSEFWKQPDGLGYKPCLDFSRDYRRASEGVVKNRRKYLMVVVSGGMNQQRNQIVDAVVIARILGAALVVPVLQVNVIWGDESEFADIFDLEHFKSVLANDVRVVSALPSTHLMTRPVEGSPPLHVTPSWIRARYLKRLKREGVLLLRGLDSRLSKDLPSDLQKLRCKVAFSALRFAKPVQELGNKISERMNSKGPYIALHLRMEKDVWVRTGCLPGLSPEYDEIINNERIQRPELLTARSNITYHERKLAGLCPLNAMEVTRLLKALGAPRNSRIYWAGGQPLGGKEALQPLIHEFPHLYSKEDLALPGELEPFAKKASLMAAIDYIVSEKSDVFMPSHGGNMGHAIQGQRAYAGHKKYITPNKRQMLPYFMNSSLPEAQFNKIIKELHQNSLGQPELRTSKAGKDVTKYPVSECMCNDSHYHS* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02772 575 CDD O-FucT_plant 188 509 IPR024709 -
Rops3g02772 575 PIRSF UCP009360 20 572 IPR024709 -
Rops3g02772 575 PANTHER OS02G0726500 PROTEIN-RELATED 128 569 - -
Rops3g02772 575 Pfam GDP-fucose protein O-fucosyltransferase 188 504 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02772 Rops-Chr3 59000992 59004141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02772 10 572 Miscellaneous Gene Families AT3G07900 64.870 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02772 - - vun:114169624 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02772 3 59000992 59004141 Rops3g02772 3 59000992 59004141 ECH