Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02771 ATGGTTGTGCTGTGTCAAAACTATGCATCTTCCACTTGGTGCCTCGACGAACTTGCCAAGATCGTTGACTGTTATGAAAACGAAGGAAAACCTGTTTCCATAATCTTTTACAAAGTGGAACCTTCGGATGTACGGAATCAGAAAAACTCTTATGCAGTGGCGATGGTTAAACACGAAAAGAGATTCGGAAAAGACTCGGAGAAGGTGAAAAGATGGAGGTACGCTTTGTCAAGAGTATGCGACCTCACCGGTGAACACTACAGGAACGATATGTATGAATCTGAGCTCATCGAGAAGATTGGAAGTACTACAATCGAAGGAATGATGCTTCATCCCCCAACACAAGAAAAAGTAGATCATTGGACTTATACTGCCTTTAAGAAGATGAAGAACCTCAGAATTTTGATTGTTCGGAATACAATATTTACATCAGGACCTACTAATCTGCCGAATAGTTTACGGCTACTCAATTGGAAAGGGTACCCATCAAAGTCATTTCCGCTAGACTTTTATCCCCACAGAATTGTTGACTTCAAGTTACCTCATAGTTCTCTGATATTGAAAAAGTCATTTCAGATACTTGAAGATTTAACATTCATCAATCTCTCTGAGTGTCAATCCATAACTCAAATCCCTGACCTGTCTGGAGCTAGAAACTTAAGGGTCTTGACACTTGAAAAATGCCATAAACTGGTCAGGTTTGATAAATCCATTGGATTTATGCCTAACCTTGTGTATTTGAGTGCTTCAGGGTGCACTGTGCTCAAAAGTTTTGTGCCAAAAATGTATTTGCCCTCCCTCGAAGTACTTTCATTTAACTTTTGCAAAAAATTTGAACACTTCCCACATGTAATGCAAAAGATGGATAAGCCGTTAAAGATTCACATGATAAGTACTGCCATTAAGGAGTTTCCAAAGTCCATTGGTAACCTTACCGGGCTTGAGTATATAGACTTGTCAATTTGCAAAGGGCTCAAAGATCTGTCAAGTAACTTCTTATTGCTTCCAAAACTTGTCACGTTGAAAATTGATGGATGCTCTCAACTTGGAGAATCGTTTAGAAGGTTCAAAGAGAGCCACTCACTGGCATCTGGCTATCCAAATGTAGTGACACTTAATATTAGTGAGGCTAATCTATCATGTGAAGATCTTAATGTCATTCTTGAAATGTTTACAAAATTGGAAGACTTGAAAGTATCTCACAATGGATTCGTAGCCCTCCCGAAATGCATCAAAGAATCTTTGCACTTGAAAAGACTTGATGTGAGTTTTTGCAGGAATCTTACAGAATTTCCGGAACTTCCATTAAGTATTCAGAAAGTAGATGCAAGACACTGTCGATCCTTAACTTCAGAGGCATCAAGTGCGCTATGGTCTAAGGTTTCAAAAGAGATCCAAAGAATACAAGTTGTGATGCCGATGCTGAAAAGGGAGATTCCAGAATGGTTTGACTGTGTTTGCACTCAAGGGATTCCATTTTTCTGGGCTCGCAAGAAGTTTCCCATTGTTGCTTTAGCATTAGTTTTCCAGGAAGTACAAAAGACAGACACATTTTCCGACATTGATGATGCTATAAAATTGTTGACTGGATTTATGAACTGGCACACTGTTAGCCTCCACTTGTTTATTGATGGCCAAGAAATATGTGGCAGAGATTACCGTTATTTCAATGTTGGGGGAGATCATGTGTTATTGTGTGAATTACGAGTTTTGTTCAGCGATGAAGAGTGGCAGGCCCTTGATGCAAGTCTTGGAGATGATTGGAAGACCATTCAAGTTCAGTATGATTCGGACCTGATTCTGAGTAACTGGGGAGTTTATGTGTACAAGCAAGAAACAAACATGGATGATATCCAATTCAGGCTTCCCAATCCCAACTCCACAGGAGACTACATGCCATCATCACATTTGGTTCCAAAAGGATCGCCAGAGCAGAAAATGAGACATATGCTTGAAAGTTTTAATCCCAGAGACTTGTTTAACCAGTATTTGCCTATACTAGAATCAGAAGAAGGTCCAGTCAGGTCTTCAAATGTACTTTTGAGGTCTTGGAGGAATGCTAAGGCTGAAATTAGAGAGGAAGCTTTAGCCTCCATCTTTGGGGCAAGTTTAAAGCAAGAACATGAAGAATCTACAGAAGATGTGGTACAGGTTTTAGAGATGATAAAGGAGAATGTACCCAAACATATTGTTGATTCATACCCTGAAGATGTTCAAAATGCATGCAGATTAGCAGAAAGATTATTAAGGGCACGGGCAGAATTAATGAAGGAAAACAGGTTGGACACCGGTATGCCTATTATTCTTGAGTATGCTGATATAGGAGGAGCTACAACCAGACGCTTTTGGGGACTCTTGGAGATAAAAGTAGAAGATCCATTTTTCAAAGCAGTATTGAGGAAGCTAAACCATCTTACATGGGAATATAATACTAGCAACGAAGCCTCAAGCTCTGGCAATGGGTTGGCAAACTTGACGGTACCCATTGTTCTATTGAAATCTCAGGGTCTAGCTACAGAGGAAGCTTCAAGCTCTAGCTATGAGGAATCCTTGGAGGAAGGATATTACGATCCTGAATTGGAAGATTTAATGAGGAGGATAGAGCAAGATGCTATGAGCTTGAATAAATCTTATGGGAAAATGAAGGCAACTATTGTTCGAACGGATAAATCAATTTCTGAAAAATATCTATTGGAACTGTTAATAATCAGAAGACTAATAATATTGGAAAGATTGACGATGTTTGGATCTATGATCAAGTTCAAGATAACACCTTATGGGAAAATGAGGGTAGATGACGATCCTTTGCGCACTCTGAAGACATGTATCTGGGGTTTTATCTTGGTTCTTTTTGTCCTAATCATATGTTTATTTTGTTTTATAGGATATGTGGGACTTCTTTGTTATAGGACACCAATAATAAGAAAGTTATTAGTGTGGGGTTGGTGGCTTGTCATGCAAATTTTTGTGTCTTGTAAATACTTATACTGGAGAATTGGTAAGGTTGTGAGACTAAAGGAGAAGGAATTATAG 3033 0.3907 MVVLCQNYASSTWCLDELAKIVDCYENEGKPVSIIFYKVEPSDVRNQKNSYAVAMVKHEKRFGKDSEKVKRWRYALSRVCDLTGEHYRNDMYESELIEKIGSTTIEGMMLHPPTQEKVDHWTYTAFKKMKNLRILIVRNTIFTSGPTNLPNSLRLLNWKGYPSKSFPLDFYPHRIVDFKLPHSSLILKKSFQILEDLTFINLSECQSITQIPDLSGARNLRVLTLEKCHKLVRFDKSIGFMPNLVYLSASGCTVLKSFVPKMYLPSLEVLSFNFCKKFEHFPHVMQKMDKPLKIHMISTAIKEFPKSIGNLTGLEYIDLSICKGLKDLSSNFLLLPKLVTLKIDGCSQLGESFRRFKESHSLASGYPNVVTLNISEANLSCEDLNVILEMFTKLEDLKVSHNGFVALPKCIKESLHLKRLDVSFCRNLTEFPELPLSIQKVDARHCRSLTSEASSALWSKVSKEIQRIQVVMPMLKREIPEWFDCVCTQGIPFFWARKKFPIVALALVFQEVQKTDTFSDIDDAIKLLTGFMNWHTVSLHLFIDGQEICGRDYRYFNVGGDHVLLCELRVLFSDEEWQALDASLGDDWKTIQVQYDSDLILSNWGVYVYKQETNMDDIQFRLPNPNSTGDYMPSSHLVPKGSPEQKMRHMLESFNPRDLFNQYLPILESEEGPVRSSNVLLRSWRNAKAEIREEALASIFGASLKQEHEESTEDVVQVLEMIKENVPKHIVDSYPEDVQNACRLAERLLRARAELMKENRLDTGMPIILEYADIGGATTRRFWGLLEIKVEDPFFKAVLRKLNHLTWEYNTSNEASSSGNGLANLTVPIVLLKSQGLATEEASSSSYEESLEEGYYDPELEDLMRRIEQDAMSLNKSYGKMKATIVRTDKSISEKYLLELLIIRRLIILERLTMFGSMIKFKITPYGKMRVDDDPLRTLKTCIWGFILVLFVLIICLFCFIGYVGLLCYRTPIIRKLLVWGWWLVMQIFVSCKYLYWRIGKVVRLKEKEL* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02771 1010 SUPERFAMILY L domain-like 119 457 - -
Rops3g02771 1010 Gene3D Ribonuclease Inhibitor 122 294 IPR032675 -
Rops3g02771 1010 Gene3D Ribonuclease Inhibitor 295 470 IPR032675 -
Rops3g02771 1010 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 83 IPR035897 -
Rops3g02771 1010 Gene3D - 1 111 IPR035897 -
Rops3g02771 1010 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 100 IPR044974 GO:0006952
Rops3g02771 1010 ProSiteProfiles TIR domain profile. 1 108 IPR000157 GO:0007165
Rops3g02771 1010 Coils Coil 738 758 - -
Rops3g02771 1010 Pfam TIR domain 2 104 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02771 Rops-Chr3 58984647 58989936 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02771 96 357 WRKY Transcription Factor Family AT4G12020 34.397 4.94e-27 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02771 - - vum:124827448 1293.49