Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02758 ATGGCGAACAATGATTTCAAGTATGATGTTTTTCTGAGTTTCAGAGGTGAAGGTGGAACTCGCTACGGATTCACCGATCATCTCTTTCAAGCTTTGCTCCGTCGCGGTATCAACGTCTTCAGAGACGATCAGAAACTGAGCATCGGCGATGAACTCAGACCTTCTCTGCTTCATGCAATAGAAGCTTCCACAATCTCAATGGTTGTGCTGTGTCAGAACTATGCATCTTCCACTTGGTGCCTCGACGAACTTACCAAAATCATTGACTGTTATGAAAACAAAGGAAAACCTGTTTCCACAATCTTTTACAAAGTGGAACCTTCAGATGTACGGTATCAGAGAAACTCTTATGAAGATGCCATGATTCAACACGAAAACAGATTCGGAAAAGACTCGGAGAAGGTGAAAAGATGGAGGTACGCTTTGTCAAGAATATGCGACCTCACCGGAGAACACTGCAGGGACGATATGTTCAATTCTTTGCATTTGCATGTATATTTGCAGGGAAGTACTGCAATTGAAGGAATAATGCTTCATCCCTCAAGACAAGAAAAAGTAGATCATTGGAATTACACTGCCTTTGAGAAGATGAAGAACCTCAGAATTTTGATTGTTCGGAATACAATATTTTCATCAGGACCTACTAATCTGCCGAATAGCTTACGACTACTCGATTGGAAGGGATACCCATCAAAGTCTTTCCCGTCAAATTTTTATCCCCGCAGAATTGTTGACTTTAAGTTACCTCATAGTTCTTTGATATTGAAAGAGCCATTCCAGAAATATGAGGTTTTGACACTTATCAATCTCTCCCAGTGTCAATCTATAACTCAAATTCCTGACCTGTCTAGAGCTAAAAGCTTACGAGTATTGGCACTTGATAATTGTCGTCAACTGAAAAGGTTTGACAAATCCCTCGGATTTATGCCTAACCTTGTGTATTTAAGTGCTTCAGGGTGCACGGAGCTTAAAAGTTTTGTGCCAAAAATGTATTTGCCATCCCTCGAAGTGCTTTCATTTAACTTTTGTACCAAATTCGAACACTTCCCACAAGTGATGCAAAAGATGGACAAGCCATTAAAGATTCACATGACATATACTGCCATTAAGGAGTTTCCAAAGTCCATTGGTAAACTTACCGGGCTTGAGTATATAAACCTGTCAAATTGCATAGGGCTCAAAGATCTATCAAGTAGCTTCTTATTGCTTCCAAAATTTGTCACATTGATAATTGATGGATGCTCTCAACTTGGAGAGTCATTTAAAAGGTTCAAAAAGAGCCATTCATTAGCAAATGGTTATCCAAATTTAGTGACACTTCATTTTAGCGAGGCTAATCTATCAAATATAGATCTTAATGCCATTCTTGAAATGTTTACAACATTGGAAGACTTGAAAGTATCGCACAATGGATTTGAAGCCCTACCAGAACACATCAAAGAATCTTCGCACTTGAAAAGTCTTGATGTGAGTTTTTGCAGGAATCTTAGGAAAATTCCAGAACTTCCATTAAGTATTCAAAAAGTAGATGCAAGACACTGTCAATCCTTAACTTCAGAGGCATCAAGCATACTATGGTCTAAGGTTTCAAAAGAGATTCCAAGAATACAAGTTGTGATGCCGATGCTGAAAATGGAGATTCCGGAATGGTTTGACTTCGTCTGCACTCAAAAAATTCCACTTTTCTGGGTTCGCAGGAAGTTCCCCATTGTTGCTTTGGCATTAGTTTTCCAAGTAAAAAAGAGGGACAGGTCTTCTGTAATTGATCATGCTGTAAATTTGTTGACTGGATTAGTGGGCTGGTACACTGTTAGCCTCCACTTATTTATTGACGGCCGAGAAATATGTGCCAGAGATTACCATTTTTTCAATGTTGGGGAAGATCATATGTTATTGTGTGATCTACGAGTTTTGTTCAGCGATAAAGAGTGGCAGGCCCTTGATGCAAGTCTAGGAGATGATTGGAAGACCATTCAGGTTCAATATGATTCAGAGATGATTTTGAGTAAGTGGGGAGTTTATGTGTACAAGCAGGAAACAAACATGGATGATATCCAATTCATGCCTCCCAATCCCAACTCCACAAAAGACTATATGTCAATGCCATCATCACGTTTGGTTCCAAAAGTATCTCTGGAGCAGAAAATTAGACATATGCTGGAAACTTTTAACCCCAGAGACATGTTTAATGAGTGTTTGACTCTATTAGAATCAGAAGAAGGTCCAGCCAAGTTTTCAATATTTTTGAGGTTTTTGAGGAACACTAAGGCTGAAATTAGAGCGGAAGCTTCAGCCTCTGTCTATGGGGCAAGTTTAAATCAAGAACATGAAGAATCTGATTATGGCGTGGTACGGGTTTTAGAGATGATAAATGAGACTATACAAGAACATTCTGCTGATTCACGCCATGAAGATATACAAAGTGTATTCAGATTAACGGAAAGATATTTGAGGGCACGAGGAGAATTAATGAAGGAAGGTAGGTTGGACATCAATATGTATATTGTTCTAGAGTATACTGATATAGGAGGAGCCACAACCAAACGCTTCTGGGGCATGTTGGAAATAAAAGCAGAAGATCCATTATTCAAAGTAGTATTAATGAAGGCAAACCAACATTTGTGGGAATTTTATACCAGCAATGAAGCTTCAAGCCCTGATCATATGTTAATACCCATTGTTCTATTGAAATGCCAGGGCACATCTACAGATGAAACTTCAAGCTCTGGCCATGAGGAATCCTTAGAGGAAGGAAACTACAATCCTCAATTGGAAGAGTTAATGACGAGGATAGAGCATGATGCTATGAGGTGGAATAAGTCTTATGGGAAAATAAAGGCATCTATTGTTCGAATACATGACCCAATTTCTGAAAAATATCTACTGGAAACAATAAGCTGCAGAACGGTAATAAAGTTGTCAAAATCGAGATGGTGGGAATCTCTGACCGAGTTTAGGATAACGCCTTATGGGAGGGTGAAGGCAGAGGACGATCCTTTGCGCCACCTGAAGATGTTATCCCGCTCTTTGTTCTTGAGATCCTATGCAAATGTTTGCCTTTTCTTATACTCTTTGTTCTTACCCCCCTATGCATATGTTTGCGCTGTATAG 3111 0.3938 MANNDFKYDVFLSFRGEGGTRYGFTDHLFQALLRRGINVFRDDQKLSIGDELRPSLLHAIEASTISMVVLCQNYASSTWCLDELTKIIDCYENKGKPVSTIFYKVEPSDVRYQRNSYEDAMIQHENRFGKDSEKVKRWRYALSRICDLTGEHCRDDMFNSLHLHVYLQGSTAIEGIMLHPSRQEKVDHWNYTAFEKMKNLRILIVRNTIFSSGPTNLPNSLRLLDWKGYPSKSFPSNFYPRRIVDFKLPHSSLILKEPFQKYEVLTLINLSQCQSITQIPDLSRAKSLRVLALDNCRQLKRFDKSLGFMPNLVYLSASGCTELKSFVPKMYLPSLEVLSFNFCTKFEHFPQVMQKMDKPLKIHMTYTAIKEFPKSIGKLTGLEYINLSNCIGLKDLSSSFLLLPKFVTLIIDGCSQLGESFKRFKKSHSLANGYPNLVTLHFSEANLSNIDLNAILEMFTTLEDLKVSHNGFEALPEHIKESSHLKSLDVSFCRNLRKIPELPLSIQKVDARHCQSLTSEASSILWSKVSKEIPRIQVVMPMLKMEIPEWFDFVCTQKIPLFWVRRKFPIVALALVFQVKKRDRSSVIDHAVNLLTGLVGWYTVSLHLFIDGREICARDYHFFNVGEDHMLLCDLRVLFSDKEWQALDASLGDDWKTIQVQYDSEMILSKWGVYVYKQETNMDDIQFMPPNPNSTKDYMSMPSSRLVPKVSLEQKIRHMLETFNPRDMFNECLTLLESEEGPAKFSIFLRFLRNTKAEIRAEASASVYGASLNQEHEESDYGVVRVLEMINETIQEHSADSRHEDIQSVFRLTERYLRARGELMKEGRLDINMYIVLEYTDIGGATTKRFWGMLEIKAEDPLFKVVLMKANQHLWEFYTSNEASSPDHMLIPIVLLKCQGTSTDETSSSGHEESLEEGNYNPQLEELMTRIEHDAMRWNKSYGKIKASIVRIHDPISEKYLLETISCRTVIKLSKSRWWESLTEFRITPYGRVKAEDDPLRHLKMLSRSLFLRSYANVCLFLYSLFLPPYAYVCAV* 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02758 1036 Pfam TIR domain 7 144 IPR000157 GO:0007165
Rops3g02758 1036 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 148 IPR035897 -
Rops3g02758 1036 SUPERFAMILY L domain-like 188 523 - -
Rops3g02758 1036 ProSiteProfiles TIR domain profile. 6 173 IPR000157 GO:0007165
Rops3g02758 1036 SMART till_3 7 148 IPR000157 GO:0007165
Rops3g02758 1036 Gene3D - 2 170 IPR035897 -
Rops3g02758 1036 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 173 350 IPR044974 GO:0006952
Rops3g02758 1036 Gene3D Ribonuclease Inhibitor 362 536 IPR032675 -
Rops3g02758 1036 Gene3D Ribonuclease Inhibitor 188 361 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02758 Rops-Chr3 58814060 58819910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02758 154 427 WRKY Transcription Factor Family AT4G12020 33.333 3.26e-27 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02758 - - vum:124827448 1079.7