Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02754 ATGAACAAACCATGCATTTATCTTGAAGGAGCTGGAAGCAACTCCACAATTATCGAATGGCCTACACATGTTAAGGCTACTTTCTATAGACAAGCAAACAATACAGTTGCAAAGGGAATCACTTTCACGCCTGAAATATTAGAGGACAATAGCATCACACAAGCCGCGGCAGCTCGGATCCAAGCACATAAACGTGCTTTCTTTGATCGTGCTTTTCTAGGGGTGCAAGACACCCTTTATGATAATTATGGTAGATATTGCTATCATAATTGCTACATTCAAGGTGTGATTGATTTCATATATGGGAATGGTCAATCAATCTTTGAGGGGAAATCTGGTCCCAAAATTGATGCGGTTATCACAGCACATGAAAGGGGTTCAGCAAATGACCCAAGCGGGTTTGTGTTTAAAAGTTGTATCATAAATGGGACAGGAGGAAAAGTTGAACTTGGTAGAGCTATGGATGCATATGCAAGAGTAATCATAGCCAATTCATTCCTATCAGATGTAGTTATACCTCAGGGTTGGAGTCCTCGGAAATATGCTGGCCATGAGTAA 558 0.4086 MNKPCIYLEGAGSNSTIIEWPTHVKATFYRQANNTVAKGITFTPEILEDNSITQAAAARIQAHKRAFFDRAFLGVQDTLYDNYGRYCYHNCYIQGVIDFIYGNGQSIFEGKSGPKIDAVITAHERGSANDPSGFVFKSCIINGTGGKVELGRAMDAYARVIIANSFLSDVVIPQGWSPRKYAGHE* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02754 185 Gene3D - 1 184 IPR012334 -
Rops3g02754 185 Pfam Pectinesterase 12 178 IPR000070 GO:0030599|GO:0042545
Rops3g02754 185 SUPERFAMILY Pectin lyase-like 2 179 IPR011050 -
Rops3g02754 185 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02754 Rops-Chr3 58749431 58750248 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02754 3 185 Carbohydrate Esterase AT2G19150 42.211 9.08e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02754 - - cam:101494460 258.84