Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02749 ATGCAGTCCCCACAACTCTTTTCTTTTATTTTAATATTGCAAGTCCTTGCTTTCGATGTTTGTGAATCCCAGAACTGTGGCAATCCACTCAAGACCATTACTGTTAGTCAATCAGGCACAGCAAATTTCAAAACAATTCAAAGTGCCATTGACTCTGTCCCTGCAGGAAACTCTCAATGGATTCACATCCAAATTTCCCCTGGAGTTTACAAAGAGAAAGTTGAAATTCCCATGAACAAACCATGCATTTATCTTGAAGGAGCTGGTAGCAACTCCACGAGTATTGAATGGGATGACCATGGTAAGACACATTTTAGTGCTACTTTCATGTCAAAAGCAAAAAATACTGCTGCAAAGGGCATTACTTTCAAGAATACATACAACAACCCTGCAATATTAGAGGACAATAGGATCATACAAGCTGTGGCAGCTAGGGTCCATGCAGATAAATGTGCTTTCTTTAATTGCTCCTTTTTAGGGGTGCAAGACACTCTGTATGATTCTTATGGCCGCCATTACTATCATAATTGCTACATTCAAGGTGGAACAGATTTCATATTTGGGAATGGTCAATCTATCTTTGAGGCAAGTATAATATACTTTTCCATGGGGAAATCTGGTCCCAAAAGGGATGGGGTTATTACAGCACAAGAAAGGGGTTCACCAAATGATCCTAGTGGGTTTGTATTTAAAAATTGTATCATAAATGGGACAGGAGGAAAGACTGAAATTGGTAGAGCTATGAATGCATATGCAAGAGTCATCGTAGCCAATTCAATCTTATCAGATGTGGTTAGACCTGAGGGTTGGAGTTCTCGTCAATATGGTGGCCATGAGTAA 840 0.3964 MQSPQLFSFILILQVLAFDVCESQNCGNPLKTITVSQSGTANFKTIQSAIDSVPAGNSQWIHIQISPGVYKEKVEIPMNKPCIYLEGAGSNSTSIEWDDHGKTHFSATFMSKAKNTAAKGITFKNTYNNPAILEDNRIIQAVAARVHADKCAFFNCSFLGVQDTLYDSYGRHYYHNCYIQGGTDFIFGNGQSIFEASIIYFSMGKSGPKRDGVITAQERGSPNDPSGFVFKNCIINGTGGKTEIGRAMNAYARVIVANSILSDVVRPEGWSSRQYGGHE* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02749 279 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 27 274 - -
Rops3g02749 279 SUPERFAMILY Pectin lyase-like 31 274 IPR011050 -
Rops3g02749 279 Pfam Pectinesterase 33 272 IPR000070 GO:0030599|GO:0042545
Rops3g02749 279 Gene3D - 28 279 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02749 Rops-Chr3 58620678 58623103 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02749 7 279 Carbohydrate Esterase AT2G19150 46.182 4.26e-72 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02749 - - mtr:25501033 420.624