Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02748 ATGAAGTCCCCACAATTCTTTTCTTACATTTTAATGTTGCTAGTCCTTGCTTTTGATACTTGTGAATCCCAGAACTGTGCCAATCCACTAAAGATAATTACTGTTAGTCAATCAGGCACAGCAAATTTCAAAACAATTCAAAGAGCAATTGACTCTGTCCCCGCAGGAAACTCTCAATGGATTCGCATCCAAATTTCCCCTGGAGTTTACAAAGAGCAAGTCGGAATTCCCATGAACAAACCATGCATTTATCTTGAAGGAGCTGGTAGCAAGTCCACAATTATCGAATGGCCTACACATGTTAATGCTACTTTCTATACAAGAGCAAATAATACAGCTGCAAAGGGAATTGCTTTCATGCCTGTAATATTAGCGGACAATAGCATCACACAAGCCGCGGCAGCTCGGATCCAAGCAGATAAATGTGCTTTCTTTGATTGTGCTTTTCTAGGGGTGCAAGACACCCTTTATGATAATTATGGTAGACATTACTATCATAATTGCTACATTCAAGGTGGAACTGATTTCATATATGGGAATGGTCAATCAATCTTTGAGGCAAGTACAATATATTTTTCAATGGGGAAATCTGGTCTCAAAAAGGATGGGGTTATTACAGCACAAGAAAGGGATTCACCAAATGATCCTAGTGGGTTTGTGTTCAAAAATTGTATCATAAATGGGACAGGAGGGAAGGCTGAACTTGGGAGAGCTTTGACTGCATATGCAAGAGTCATCATAGCCAATTCATTCTTATCAGATGTGGTTAATCCTAAGGGTTGGAGTCCTCGGACCTATGCTGGTCATGAGAAAGACCAACACGAATTAGTGCAAGAATCAAGAAATTGCAAGACCTTTTCCCAAAATCAGACAAGGCAATTTGATGACTGGATGCTTTCCTCTTGGCAGTAA 912 0.4002 MKSPQFFSYILMLLVLAFDTCESQNCANPLKIITVSQSGTANFKTIQRAIDSVPAGNSQWIRIQISPGVYKEQVGIPMNKPCIYLEGAGSKSTIIEWPTHVNATFYTRANNTAAKGIAFMPVILADNSITQAAAARIQADKCAFFDCAFLGVQDTLYDNYGRHYYHNCYIQGGTDFIYGNGQSIFEASTIYFSMGKSGLKKDGVITAQERDSPNDPSGFVFKNCIINGTGGKAELGRALTAYARVIIANSFLSDVVNPKGWSPRTYAGHEKDQHELVQESRNCKTFSQNQTRQFDDWMLSSWQ* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02748 303 Gene3D - 28 300 IPR012334 -
Rops3g02748 303 Pfam Pectinesterase 33 263 IPR000070 GO:0030599|GO:0042545
Rops3g02748 303 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 23 290 - -
Rops3g02748 303 SUPERFAMILY Pectin lyase-like 32 286 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02748 Rops-Chr3 58607289 58610584 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02748 6 270 Carbohydrate Esterase AT2G19150 44.161 3.14e-65 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02748 - - mtr:25501033 405.216