Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02734 ATGGTGCAGCCCCTACATTCTTCCTACACAAGCTCTCACTTGCCCCTGCAACTCGTTGATACCAAGAGGTGGTGTAAGGATGCCCAAGTTCTCCCTCACCATCAATGGTTGGACGTGAGAAATGGTTGGGATTGTCTTCATGAGTTTCTCTTATGCTACCTTGCTCTCAATCCCACACATACCCACAAGCATATTGTTCGTGCTTTCACACACCTTGTTGTGGACCTTTGCTCACAAGTTGAAGTCGCCAAGTTAAAAACCAGCCTTGATCAGGACTCCACTCACGTTCGAATAGATGAATCAAGAGCCTCTCAAGATGGTTCGGACGAAGGCAAAGATAATATAAAGAAGCACCAAATCCGGCTTGCTTATGATATTGTTGTCTCAGCTGCCTCTTATGTCCAATTGCGAGCTAAGGACTTCATGTCCCTTGCTACTAAGTCACAACAGAGTGATATAGAGGATTCTAATGGAAGAGAGGACTCACCACGAGAGGAGACAGAAGGCACTTCGCGGGTCTATAAATCAGAGGTCGCAGCTTACATGGCTGCATCAACAATGACTGCTGTAGTCGCAGCAGGAGAGAAGGAAAAGCAGGAAGCAGCAAAGGACCTCCAGTCGCTTCATTCATCACCTTGCGAATGGTTTGTTTGTGATGATTTCAGCACTTACACTCGATGCTTTGTTGTTCAGGGTTCAGACTCCCTGGCATCTTGGCAGGCAAACCTCTTGTTCGAGCCAACCAAATTTGCAGAGCACTTGCTTATATTCACAACAGTATTGGAGTACTATGGAGCTCCAGAGCTTATATTTGGTGCAACTGAATACACCACAGCCATTGACATCCGGTCAGCTGCTTGTGTACTTGGCGAACTATTGCTTGGCCAGCCACTTTTTCCTGGGGAGAGCGGAGTAGACCAACTTGTGGAAATTATCAAGGTTTTAGGTACCCCAACAAGGGAAGAAATCAAGTGTATGAATTCTAATTACACAGAGTTTAAATTTCCTCAAATTAAAGCTCATCCATGGCACAAGATCTTTCACAAGCGAATGCCACCTGAAGTTGTGGGTCTCGTCTCAAGGCTATTGCAACACTCTCCAAATCTTCGATGCACAGCTTTGGAGGCTCTGGTTCATCCAGTCTTTGATGAGCTGCGTGATCCGAATACCCGGTTGTCAAATGGGCGTTTCCTTGCTCCACTATTCAACTTCAAAGTCGATGCCCGAATTTGA 1233 0.4607 MVQPLHSSYTSSHLPLQLVDTKRWCKDAQVLPHHQWLDVRNGWDCLHEFLLCYLALNPTHTHKHIVRAFTHLVVDLCSQVEVAKLKTSLDQDSTHVRIDESRASQDGSDEGKDNIKKHQIRLAYDIVVSAASYVQLRAKDFMSLATKSQQSDIEDSNGREDSPREETEGTSRVYKSEVAAYMAASTMTAVVAAGEKEKQEAAKDLQSLHSSPCEWFVCDDFSTYTRCFVVQGSDSLASWQANLLFEPTKFAEHLLIFTTVLEYYGAPELIFGATEYTTAIDIRSAACVLGELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNSNYTEFKFPQIKAHPWHKIFHKRMPPEVVGLVSRLLQHSPNLRCTALEALVHPVFDELRDPNTRLSNGRFLAPLFNFKVDARI* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02734 410 MobiDBLite consensus disorder prediction 149 171 - -
Rops3g02734 410 SUPERFAMILY Protein kinase-like (PK-like) 263 388 IPR011009 -
Rops3g02734 410 Gene3D Transferase(Phosphotransferase) domain 1 242 409 - -
Rops3g02734 410 MobiDBLite consensus disorder prediction 153 171 - -
Rops3g02734 410 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 262 405 - -
Rops3g02734 410 SMART serkin_6 172 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02734 410 ProSiteProfiles OVATE domain profile. 8 75 IPR006458 -
Rops3g02734 410 Pfam Protein kinase domain 262 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02734 410 Pfam Transcriptional repressor, ovate 41 76 IPR006458 -
Rops3g02734 410 ProSiteProfiles Protein kinase domain profile. 1 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02734 410 MobiDBLite consensus disorder prediction 94 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02734 Rops-Chr3 58218775 58220089 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02734 173 275 Acyl Lipid Metabolism Gene Families AT3G61680 67.961 1.78e-33 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Rops3g02734 Pkinase 1e-13 CL0016
TF OFP Rops3g02734 Pkinase 1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02734 K00924 - nnu:104611240 271.937