Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02733 ATGAACGTGGAAGAAGAATGGTTCTGTTGGAGCTTTCCCTTGGGGTTGTTAAAGACATGGCAGCACCAAGGGTCCCTGTTTCTGCATGGTGCAGCCCCTACATTCTTCCTACACAAGCTCTCATTGCCCCTGCAACTCGTTGATACCAAGAGGTGGTGTAAGGATGCCCAAGTTCTCCCTCACCATCAATGGTTGGACGTGAGAAATGGTTGGGATTGTCTTCATGAGTTTCTCTTATGCTACCTTGCTCTCAATCCCACACATACCCACAAGCACATTGTTCGTGCTTTCACACACCTTGTTGTGGACCTTTGCTCACAAGTTGAAGTCGCCAAGTTAAAAACCAGCCTTGATCAGGACTCCACTCACGTTCGAATAGATGAATCAAGAGCCTCTCAAGATGGTTCGGACGAAGGCAAAGATAATATAAAGAAGCACCAAATCCGGCTTGCTTATGATATTGTTGTCTCAGCTGCCTCTTATGTCCAATTGCGAGCTAAGGACTTCATGTCCCTTGCTACTAAGTCACAACAGAGTGATATAGAGGATTCTAATGGAAGAGAGGACTCACCACGAGAGGAGACAGACGGCACTTCGTGGGTCTATAAATCAGAGGTCGCAGCTTACGTGGCTGCATCAACAATGACTGCTGTAGTCGCAGCAGGAGAGAAGGAAAAGCAGGAAGCAGCAAAGGACCTCCAGTCGCTTCATTCATCACCTTGCGAATGGTTTGTTTGTGATGATTTCAGCACTTACACTCGATGCTTTTTTATTCAGGGTTCAGACTCCCTGGCATCTTGGCAAGCAAACCTCTTGTTCGAGCCAACCAAATTTGCAGAGCACTTGCTTATATTCACAACAGTATTGGAGTACTATGGAGCTCCAGAGCTTATATTTGGTGCAACTGAATACACCACAGCCATTGACATCCGGTCAGCTGCTTGTGTACTTGGCGAACTATTTCTTGGCCAGCCACTTTTTCCTGGGGAGAGCGGAGTAGACCAGCTTGTGGAAATTATCAAGGTTTTAGGTACCCCAACAAGGGAAGAAATCAAGTGTATGAATTCTAATTACACAGAGTTTAAATTTCCTCAAATTAAAGCTCATCCATGGCACAAGATCTTTCACAAGCGAATGCCACCTGAAGTTGTGGGTCTCGTCTCAAGGCTATTGCAACACTCTCCAAATCTTCGATGCACAGCTTTGGAGGCTCTGGTTCATCCAGTCTTTGATGAGCTGCGTGATCCGAATACCCGGTTGTCAAATGGGCGTTTCCTTCCTCCACTATTCAACTTCAAAGTCGATGCCCGAATTTGA 1317 0.4617 MNVEEEWFCWSFPLGLLKTWQHQGSLFLHGAAPTFFLHKLSLPLQLVDTKRWCKDAQVLPHHQWLDVRNGWDCLHEFLLCYLALNPTHTHKHIVRAFTHLVVDLCSQVEVAKLKTSLDQDSTHVRIDESRASQDGSDEGKDNIKKHQIRLAYDIVVSAASYVQLRAKDFMSLATKSQQSDIEDSNGREDSPREETDGTSWVYKSEVAAYVAASTMTAVVAAGEKEKQEAAKDLQSLHSSPCEWFVCDDFSTYTRCFFIQGSDSLASWQANLLFEPTKFAEHLLIFTTVLEYYGAPELIFGATEYTTAIDIRSAACVLGELFLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNSNYTEFKFPQIKAHPWHKIFHKRMPPEVVGLVSRLLQHSPNLRCTALEALVHPVFDELRDPNTRLSNGRFLPPLFNFKVDARI* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02733 438 SMART serkin_6 200 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02733 438 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 290 433 - -
Rops3g02733 438 ProSiteProfiles Protein kinase domain profile. 1 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02733 438 MobiDBLite consensus disorder prediction 177 197 - -
Rops3g02733 438 Gene3D Transferase(Phosphotransferase) domain 1 272 437 - -
Rops3g02733 438 SUPERFAMILY Protein kinase-like (PK-like) 291 432 IPR011009 -
Rops3g02733 438 ProSiteProfiles OVATE domain profile. 36 103 IPR006458 -
Rops3g02733 438 MobiDBLite consensus disorder prediction 181 197 - -
Rops3g02733 438 Pfam Protein kinase domain 290 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02733 438 Pfam Transcriptional repressor, ovate 69 104 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02733 Rops-Chr3 58206929 58208327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02733 193 303 Acyl Lipid Metabolism Gene Families AT3G61680 64.865 7.71e-33 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Rops3g02733 Pkinase 2.2e-13 CL0016
TF OFP Rops3g02733 Pkinase 2.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02733 K00924 - aof:109849726 273.478