Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02728 ATGGAAGAAAGGAAAGGAAGAGTGTGTGTTACAGGAGGTACAGGGTTTATTGGTTCATGGATAATAAAGAGGCTCCTTGAAGATGGTTACTCTGTTAACACCACTGTGAGACCTGACCCAGAACACGAGAAAGATGTTAGCTTTCTTACCAACTTACCTGGAGCATCCCAGAGGCTACAAATTCTCAGTGCAGACCTCAGCAATCCAGAAAGTTTCAGTGCAGCCATTGAAGGGTGCATTGGTGTTTTCCATGTTGCTACCCCTGTTGACTTTGAATTAACAGAACCTGAGGAAGTAGTGACCAAAAGATCCATTGATGGTGCACTAGGCATTTTGAAGGCTTGCCTCAATTCTAGGACTGTGAAGCGAGTTGTTTACACGTCTAGTGCTTCTGCTGTGACTTTTTCCAATGGGAAAGACGAACAAGTGAAGGATGAAAGTTCTTGGAGCGATGTAGATTATCTTAGAGCTTCAAATCCATTTGGTTGGTCATATGCTGTATCTAAGACATTGACAGAAAAGGCAGTGCTTGAATTTGGAGAACAGAATGGATTGGGAGTTGTGAATATTGTTCCATCTTTTGTTTTTGGACCCTTCATTTGTCCAAAGCTTCCTAGCTCAGTTCGTGCTTCATTGAATATGGCATCCGGTGAGAGAGGTCCATTTGGTTATGTCCTTCAGACACCTATGGTGCATGTGGATGATGTGGCTAGAGCGCATGTATTTATGCTTGAACATCCTAATCCACGAGGGAGATATAATTGTTCATTATGTTTGGTAACTGCTGAAGGGTTATCTGAACTTGTTTCTTCCAAATACCCAGAATTTCAACTACCAAAGGAGGACTCTTTCAAGCAAAATGAAGGTGTCAAGCTACCAAATTTATCTTCAAAGAAGCTCTTGGATGCTGGATTTTTGTTCAAGTATGGACTCGAGGAGATGGTTGATGATGCAATTCAATGCTGCAAGAAAAAGGGTTACCTGCAATATGGCTGTGTATCCCTTTTAGTTTCATAA 1017 0.4169 MEERKGRVCVTGGTGFIGSWIIKRLLEDGYSVNTTVRPDPEHEKDVSFLTNLPGASQRLQILSADLSNPESFSAAIEGCIGVFHVATPVDFELTEPEEVVTKRSIDGALGILKACLNSRTVKRVVYTSSASAVTFSNGKDEQVKDESSWSDVDYLRASNPFGWSYAVSKTLTEKAVLEFGEQNGLGVVNIVPSFVFGPFICPKLPSSVRASLNMASGERGPFGYVLQTPMVHVDDVARAHVFMLEHPNPRGRYNCSLCLVTAEGLSELVSSKYPEFQLPKEDSFKQNEGVKLPNLSSKKLLDAGFLFKYGLEEMVDDAIQCCKKKGYLQYGCVSLLVS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02728 338 CDD FR_SDR_e 8 305 - -
Rops3g02728 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 323 IPR036291 -
Rops3g02728 338 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 319 - -
Rops3g02728 338 FunFam Dihydroflavonol reductase 5 330 - -
Rops3g02728 338 Pfam NAD dependent epimerase/dehydratase family 8 255 IPR001509 -
Rops3g02728 338 Gene3D - 5 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02728 Rops-Chr3 57928923 57943523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02728 2 319 Miscellaneous Gene Families AT4G27250 34.431 4.08e-64 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02728 - K13265 gmx:100796029 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02728 3 57928923 57943523 Rops3g02728 3 57928923 57943523 ECH