Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02720 ATGGGTCAGAGTTTTGGCGGGTTCAAAGCACACACCTCGTATTTCACTCTCATCCCACAAACCTCACTTTGCTTTAAAGCATATTTTTCAAACCATTTGCGAAAGTTAAAACTCCAAAATTTTGAGTTGAATTTGCTTGATTTGAAATTCACCATGGTTGATCAGGTTCAGCACCCTAGAACCATTGAGAATGTTGCAGGCCAGCTCCACCTCCGTTCTGGTCTTTCTTTGTACCAAAGACGCTCATTCGGGAATTACTCCAATCCCGCATTGCAATATCCAGTGATGCCATCATGCAGAGCTACAACTGATTTGTCTGCTTTTACACCAACAGCCTCCCCTATCTTTGTTGGTGCCCCTGCAGAGAAAAACTTTCTTGTTGACTTTCTCATGGGTGGAGTTTCAGCTGCTGTATCCAAAACTGCTGCTGCTCCCATTGAAAGGGTTAAACTTTTGATCCAGAACCAGGATGAGATGATTAAGGCTGGTAGACTTTCTGAGCCATATAAGGGTATTTCAGATTGTTTCAAGAGAACAATACAAGATGAGGGTGTAGGTTCCCTATGGAGAGGTAACTCTGCAAATGTCATCCGTTATTTCCCCACTCAGGCCTTGAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAATTTCAATAAGGATAGGGATGGTTACTGGAAATGGTTTGCTGGAAACTTGGCCTCAGGAGGTGCTGCTGGTGCCTCATCCCTTATGTTTGTCTACTCCCTTGACTATGCTCGTACCCGTCTGGCTAATGATGCAAAGGCTGCAAAGAAAGGTGGAGAAAGGCAATTCAATGGTCTTATTGATGTTTACAAGCAGACTTTGAAATCTGATGGTGTTGCTGGTCTTTATCGTGGTTTCAACATTTCCTGTGTTGGAATCATTGTGTATCGAGGTCTCTACTTTGGAATGTATGATTCCCTCAAGCCAGTTGTCCTGAAGGGATCTTTGCAGGATAGCTTTTTTGCTAGCTTTGCCCTTGGATGGCTCATCACCACTGGTGCAGGCCTTGCATCATACCCTATTGACACTGTTAGAAGAAGAATGATGATGACCTCTGGACAAGCTGTGAAGTACAAGAGCTCCATGGATGCATTTACTCAAATTGTCAAGAATGAGGGTACCAAGTCCTTGTTTAAGGGAGCTGGTGCTAACATTCTTCGTGCCGTTGCTGGTGCTGGTGTGCTTGCTGGTTATGACAAGTTACAGTGCAATGAAAAAGTAAAAGAGGCCAAATCTGTGTGGTGTGGGTTCTGCTACTCTCTCCAAACCATTCTGAATGTGAAGAAACAAACCAGTTGTTGTTGTTGTTGA 1341 0.437 MGQSFGGFKAHTSYFTLIPQTSLCFKAYFSNHLRKLKLQNFELNLLDLKFTMVDQVQHPRTIENVAGQLHLRSGLSLYQRRSFGNYSNPALQYPVMPSCRATTDLSAFTPTASPIFVGAPAEKNFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGISDCFKRTIQDEGVGSLWRGNSANVIRYFPTQALNFAFKDYFKRLFNFNKDRDGYWKWFAGNLASGGAAGASSLMFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKQTLKSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLKGSLQDSFFASFALGWLITTGAGLASYPIDTVRRRMMMTSGQAVKYKSSMDAFTQIVKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQCNEKVKEAKSVWCGFCYSLQTILNVKKQTSCCCC* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02720 446 Gene3D Mitochondrial carrier domain 126 416 IPR023395 -
Rops3g02720 446 FunFam ADP,ATP carrier protein, mitochondrial 126 419 - -
Rops3g02720 446 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 216 IPR018108 -
Rops3g02720 446 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 121 419 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops3g02720 446 SUPERFAMILY Mitochondrial carrier 123 410 IPR023395 -
Rops3g02720 446 PRINTS Mitochondrial carrier protein signature 337 359 IPR002067 GO:0055085
Rops3g02720 446 PRINTS Mitochondrial carrier protein signature 141 155 IPR002067 GO:0055085
Rops3g02720 446 PRINTS Mitochondrial carrier protein signature 293 311 IPR002067 GO:0055085
Rops3g02720 446 PRINTS Mitochondrial carrier protein signature 128 141 IPR002067 GO:0055085
Rops3g02720 446 PRINTS Mitochondrial carrier protein signature 243 261 IPR002067 GO:0055085
Rops3g02720 446 PRINTS Mitochondrial carrier protein signature 191 211 IPR002067 GO:0055085
Rops3g02720 446 PRINTS Adenine nucleotide translocator signature 169 190 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops3g02720 446 PRINTS Adenine nucleotide translocator signature 228 241 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops3g02720 446 PRINTS Adenine nucleotide translocator signature 202 214 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops3g02720 446 PRINTS Adenine nucleotide translocator signature 333 349 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops3g02720 446 PRINTS Adenine nucleotide translocator signature 125 137 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops3g02720 446 ProSiteProfiles Solute carrier (Solcar) repeat profile. 228 320 IPR018108 -
Rops3g02720 446 Pfam Mitochondrial carrier protein 123 220 IPR018108 -
Rops3g02720 446 Pfam Mitochondrial carrier protein 227 323 IPR018108 -
Rops3g02720 446 Pfam Mitochondrial carrier protein 329 410 IPR018108 -
Rops3g02720 446 ProSiteProfiles Solute carrier (Solcar) repeat profile. 328 414 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02720 Rops-Chr3 57640379 57649297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02720 52 413 Antiporters AT5G13490 76.903 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02720 K05863 - gmx:100819556 622.083