Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02719 ATGAATGATGGTAGACAAATGGGGTTGCATTACATGGATGCTGGCTTTCCTTATGCTGTTAATGAAAGCTTTGTGGATTTCTTTCAAGGCCTTACCAATGTGCCTGTGAATTATGCCTTTGCTGGGTCAATGCCTGATCAGGAAAGTGTCTACTGGTCAATGAACATGAATCCTTATAAGTTTGGATTGTCTGGCCCTGGTAATACATCTTATTATAGTTCTTATGAGGTAAATGATCATTTGCCAAGAATGGAGATCAACAGGGCTGAGTGGGAGTACCCTTCAGAAATTATCAATGAGGAACCGGCTACAACAGATTCTCCACCTAGAAGAGATGGAGTCACGAGCATGCAGACTATCCCTGAAGAATGTAGTCCAAATCATCAAGAGTCCAGTAGTAGCCAGGTCATATGGCAAGACAACATCGATCCTGACAATATGACTTATGAGGAACTACTGGACCTTGGGGAGACAGTTGGAACTCAAAGCCGAGGTCTTTCCCAAGAGCTTATTGATATGCTTCCAACTTCAAAGTACAAATTTGGTAGCTTATTCAAAAGAAAAAATTATGGGAAAAGGTGCGTAATCTGTCAGATGACATATAGAAGAGGTGACCAGCAAATAAAATTGCCATGCAGTCATGTTTATCATGGTGAATGCATTACCAAATGGCTTAGCATTAACAAGAAATGTCCTGTTTGTAACATTGAGGTTTTTGGTGAGGAATCAATGCAGTAG 738 0.4065 MNDGRQMGLHYMDAGFPYAVNESFVDFFQGLTNVPVNYAFAGSMPDQESVYWSMNMNPYKFGLSGPGNTSYYSSYEVNDHLPRMEINRAEWEYPSEIINEEPATTDSPPRRDGVTSMQTIPEECSPNHQESSSSQVIWQDNIDPDNMTYEELLDLGETVGTQSRGLSQELIDMLPTSKYKFGSLFKRKNYGKRCVICQMTYRRGDQQIKLPCSHVYHGECITKWLSINKKCPVCNIEVFGEESMQ* 246
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02719 245 MobiDBLite consensus disorder prediction 109 135 - -
Rops3g02719 245 SUPERFAMILY RING/U-box 193 239 - -
Rops3g02719 245 MobiDBLite consensus disorder prediction 99 135 - -
Rops3g02719 245 FunFam E3 ubiquitin ligase BIG BROTHER 156 239 - -
Rops3g02719 245 SMART ring_2 194 234 IPR001841 -
Rops3g02719 245 Pfam Ring finger domain 193 235 IPR001841 -
Rops3g02719 245 ProSiteProfiles Zinc finger RING-type profile. 194 235 IPR001841 -
Rops3g02719 245 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 156 239 IPR013083 -
Rops3g02719 245 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 241 IPR033276 GO:0004842|GO:0016567|GO:0046621
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops3g02719 Rops-Chr3 57634209 57640838 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02719 10 245 C3H Transcription Factor Family AT3G63530 56.118 3.07e-99 288
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02719 K19045 - gmx:100785290 469.159