Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02660 ATGGTTATGGCTGCTAAGACCCAGTTTCATGTTTTGGCTGTTGATGACAGTCTTATTGACAGAATGTTGATTGAGAGGCTCCTAAAAACCTCTTCTTTTCATGTTACTGCAGTGGACTCTGCCAGTAAGGCTTTAAAATTTCTTGGTTTGGTGGAAGATGAGTTGATTACTTTTAACACTTCTGTTGCTTCAGAAATTCATCAGGATGTAGAAGTAAACCTGATCATAACAGATTACTGCATGCCAGGGATGACTGGCTATGATCTGCTGAGAAAAATCAAGGAATCTAAATCTCTTAAAGACATACCAGTAGTGATTATGTCCTCTGAGAATGTTCCATCAAGGATCAATAGATGCTTGGAAGAGGGAGCTGAAGAATTCTTCTTGAAACCAGTTCAACAATCAGATGTAAACAAGCTCAAGCCTCATTTATTGAAATCAAGAGTTAAGGAAGAGAAAGACCAGCCTATCAACAACAAAAGGAAGGGCATGGAAGAAAGCCATTCACCAGATAAAACAAGACTAAGATGTAGCAATTAA 540 0.3833 MVMAAKTQFHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSASKALKFLGLVEDELITFNTSVASEIHQDVEVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLKPHLLKSRVKEEKDQPINNKRKGMEESHSPDKTRLRCSN* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02660 179 Gene3D - 10 176 - -
Rops3g02660 179 Pfam Response regulator receiver domain 11 137 IPR001789 GO:0000160
Rops3g02660 179 SMART REC_2 9 144 IPR001789 GO:0000160
Rops3g02660 179 CDD REC_typeA_ARR 11 140 - -
Rops3g02660 179 SUPERFAMILY CheY-like 8 146 IPR011006 -
Rops3g02660 179 ProSiteProfiles Response regulatory domain profile. 10 145 IPR001789 GO:0000160
Rops3g02660 179 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 163 IPR045279 GO:0009736
Rops3g02660 179 MobiDBLite consensus disorder prediction 143 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02660 Rops-Chr3 56525665 56527074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02660 1 157 Response Regulator Gene Family AT2G41310 65.605 2.15e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops3g02660 Response_reg 6.8e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02660 K14492 - gmx:100787436 310.071