Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02656 ATGAGCAGTGTTCCGCACATGACCAACATTTGCACGTGCCACTTGATTTCCCCCTTGCTTTTGAATTTCGAAAGCTTTCCCGGCGGTCATGTCACACATGAAGATGCTTCTTCTTCTTTGTTATCCAAGCATTTATGCTTTAGACATGATGAAGGTGCTTCTTCTTCCTCCTTAAGGGTGCTAATAACAAGGAAGATCTCTCTTGATGGTCGTGGCAGGAGAGGGGAGAAAGAGAGGGTTTCGACTCCACCATGGTCCCTAACCTCACCTTCATCGGAAAAGCACCACCACGATTTGTTTGCCTATAATAACATTAGCAAACCTTTTGGTGACAGGGAGGAGGCTGGCGTGAAACCGTCAGGAATTGGGGTACATGGTAACAGTCAACATCAGGCAGCAGGGTTATATCTCAGAGAGCAACGCATTTGGCAAGCTGCTATGGAAGACTTAATGTCAAAAGGGATGCGCTATGCCAAACCGGCTCTTCTATCTGGATACTCTGCAGGAGGCTTAACATCTATACTGCATTGTGATGAATTTTGGGAATTGTTTCCTATAACCACAAGAGTAAAGTGCTTAAGTGATGCTGGATTATTCCTTGATGTTGTTGATGTATTTGGCCGTCACAGTTTAAGGAATATATTCAAAGGTATGGTCACCTTACAGTGA 669 0.4439 MSSVPHMTNICTCHLISPLLLNFESFPGGHVTHEDASSSLLSKHLCFRHDEGASSSSLRVLITRKISLDGRGRRGEKERVSTPPWSLTSPSSEKHHHDLFAYNNISKPFGDREEAGVKPSGIGVHGNSQHQAAGLYLREQRIWQAAMEDLMSKGMRYAKPALLSGYSAGGLTSILHCDEFWELFPITTRVKCLSDAGLFLDVVDVFGRHSLRNIFKGMVTLQ* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02656 222 MobiDBLite consensus disorder prediction 71 92 - -
Rops3g02656 222 PANTHER NOTUM-RELATED 126 222 IPR004963 GO:0016787
Rops3g02656 222 Pfam Pectinacetylesterase 126 222 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02656 Rops-Chr3 56386043 56396791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02656 52 222 Carbohydrate Esterase AT2G46930 47.953 2.10e-41 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02656 K19882 - gmx:100791571 159.073