Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02636 ATGGAAGACAAAGAAGAAGCCAACCAAGACCATAACCACCCATCTCTCCTCCCTTTTCAAAACACCACTACCATTAAGGAAGAGTCTACAAAGAAACCAATTGGTGGTGGTTGTGATAGGGTGAAGAGAGATGAGTGGAGTGAAGGAGCAGTGTCTACACTTCTTGAAGCCTATGAAGCCAAATGGGTGCTTAGAAATAGAGCCAAACTCAAAGGCCATGATTGGGAAGAAGTTGGAAGACACGTGTCATCAAGAGAAAACTTTACCAAGTCGCCAAAGACATCAACACAATGCAAGAATAAGATTGAGTCCATGAAGAAGAGGTATAGATCAGAGTCAGCAACTGTAGATGGATCTTCTTCTTGGCCTCTATACTCACGTCTTGATCTTCTTCTACGTGGAACGGCGGCACCGCCACCGGCAACAGAGGTGGCGCCACCTTCTCAGCCACCACCTTCACCACTTGCCAATGCACAAAACTTTCATGGATCCAATGGTGTTGATAAGCTAGCCAAGGAAGATGGGTTAGCAACAAAGTCGTGTGACCATGTTTCTAATAAAAATTCAATGGACTCAGATAGTAGTACACCTGCTCTTTATAGCAAGAAGGACAAGTTAAGATGTAATAAGAAGAAGACAAAAATTGAGAACAAGGGAAGAAGGAAAGCATATATGGAGATAACAGAAAGCTTAAGATGGCTAGCAGAAGCTGTGGTAAGGTCAGAACAAGCAAGAATGGACACGATGAAAGAGATAGAGAGAATGAGAGTTGAAGCTGAGGCCAAGAGAGGGGAAATGGATCTTAAGAGAACTGAAATAATTGCCAATACACAATTAGAGATTGCTAGGATCTTTGCAAGTGTCAACAAAGATGTTGATTCATCATTAAGAATTGGAAGGAGTTAA 906 0.4227 MEDKEEANQDHNHPSLLPFQNTTTIKEESTKKPIGGGCDRVKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEEVGRHVSSRENFTKSPKTSTQCKNKIESMKKRYRSESATVDGSSSWPLYSRLDLLLRGTAAPPPATEVAPPSQPPPSPLANAQNFHGSNGVDKLAKEDGLATKSCDHVSNKNSMDSDSSTPALYSKKDKLRCNKKKTKIENKGRRKAYMEITESLRWLAEAVVRSEQARMDTMKEIERMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNKDVDSSLRIGRS* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02636 301 MobiDBLite consensus disorder prediction 1 37 - -
Rops3g02636 301 MobiDBLite consensus disorder prediction 140 154 - -
Rops3g02636 301 MobiDBLite consensus disorder prediction 136 203 - -
Rops3g02636 301 MobiDBLite consensus disorder prediction 13 29 - -
Rops3g02636 301 Gene3D - 46 111 - -
Rops3g02636 301 Pfam Myb/SANT-like DNA-binding domain 43 130 IPR044822 -
Rops3g02636 301 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 35 288 IPR044823 -
Rops3g02636 301 MobiDBLite consensus disorder prediction 181 197 - -
Rops3g02636 301 FunFam Trihelix transcription factor ASIL2 46 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02636 Rops-Chr3 55760812 55764549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02636 15 142 Trihelix Transcription Factor Family AT3G14180 38.931 4.18e-22 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Rops3g02636 Myb_DNA-bind_4 1.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02636 - - gmx:100793978 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02636 3 55760812 55764549 Rops3g02636 3 55760812 55764549 ECH