Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02634 ATGTCTGATACAAAGATGGATGATAATGAAAGGCCAATTTTCAGAGATATTAGACGCTATTTCTGTCAATACTGTGGCATCTGCAGGTCCAAGAAGACCCTTATTACCTCTCACATCAATTCTCACCATCAGGAGGAGGTGGAAAATGCAGGACTCCAAAGAGATCAAGAAGCAGAGGGTATAAAATTGAATACTTGTAAGGAATGTGGTGCTAGTTTCAAAAAACCTGCCTACCTATTGCAGCACATGCAAAGCCATTCACTTGAGCATTGGATCTCAGAATCCAAAATGCGTGAGGCAGCATGGTTTGACTTGATGGATCAGTATCAGGTAGGGAGACCTCTTGAGAAGCTCCATCAAGGGTGCCTCAGTCACGCTCAGTTCAAAATGAGAGGCCATATGTTTGTACTATTGATGATTGTCAGGCAAGTTACAGAAGAAAGGACCACTTGA 453 0.426 MSDTKMDDNERPIFRDIRRYFCQYCGICRSKKTLITSHINSHHQEEVENAGLQRDQEAEGIKLNTCKECGASFKKPAYLLQHMQSHSLEHWISESKMREAAWFDLMDQYQVGRPLEKLHQGCLSHAQFKMRGHMFVLLMIVRQVTEERTT* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02634 150 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Rops3g02634 150 SMART c2h2final6 64 86 IPR013087 -
Rops3g02634 150 SMART c2h2final6 20 42 IPR013087 -
Rops3g02634 150 Pfam Zinc finger, C2H2 type 65 86 IPR013087 -
Rops3g02634 150 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 91 IPR013087 -
Rops3g02634 150 SUPERFAMILY beta-beta-alpha zinc fingers 18 86 IPR036236 -
Rops3g02634 150 Gene3D Classic Zinc Finger 1 93 - -
Rops3g02634 150 FunFam Zinc finger 45-like 60 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02634 Rops-Chr3 55705063 55707551 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Rops3g02634 zf-C2H2 0.0001 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02634 K09191 - twl:120007025 136.346