Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02626 ATGAGGTTGAGAAACATGGGGCCATTTGGGTCTTTTGCTAAAGAAGGATCGGAAAAGGCATTCACTGTTGCGAAGTTCTTCCGTTTTCTACATACCTTTGGTCCTAGCTTGCTTTCGGCAATTGATTTGACACCAAATGTGTTTTTAGCTGAAAGGATCTTTATCCGTTTTGGTAAAGCTACTCATGGAGATATTCTAGTGTTGTGCTCACCTCAAAACCCTAGAAAGTTTTTCACCAAATGCTTGGCTGGAATGGAGGGTGATGATTATATTTCTAGTCCCCGTAATGGTGATAAGCATGGAAATGTTTTGGGAGATAACATATATAATACCAATGATTCAAGAAATTTTGGTCCTGTTCCTTATGGCCTTATCGAGAGCAGGATATTCTGGAGGGTATGGCCACTTAAAGATTTTGGACCTTTCTAG 429 0.4009 MRLRNMGPFGSFAKEGSEKAFTVAKFFRFLHTFGPSLLSAIDLTPNVFLAERIFIRFGKATHGDILVLCSPQNPRKFFTKCLAGMEGDDYISSPRNGDKHGNVLGDNIYNTNDSRNFGPVPYGLIESRIFWRVWPLKDFGPF* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02626 142 Gene3D Umud Fragment, subunit A 19 139 - -
Rops3g02626 142 SUPERFAMILY LexA/Signal peptidase 45 142 IPR036286 -
Rops3g02626 142 CDD S26_SPase_I 47 129 IPR019533 GO:0004252|GO:0006465
Rops3g02626 142 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 24 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02626 Rops-Chr3 55519772 55520741 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02626 46 142 MADS-box Gene Family AT1G29960 48.148 4.78e-29 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02626 K09647 - csin:114265272 145.206