Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02603 ATGTGCTGTTCTGTAAAAACAAATGCATCACTGGTGTTCAGCTTTGCAAACCAGGCCGGACTAGACATGCTTGAAACTACTCTGGTTGCCCTTCGAGATATAATGCTTGATAAAGTCCTTGATGAAGCTGGCAGGAAGATTCTTTGCTCTAAGTTCTCCAAGATAATGCAACAGGGAGTTGCATATCTGCCTGCAGGGATATGTGTATCGAGTATGAATAGGCCAGTGTCGTATGAGCAGGCCATTGCATGGAAAGTTCTGAATGATGATGACTCCAATCACCGCCATGCCTTGTTCCTCCCATGTCGTTTCATTGGTTGTTGGTGCTTGCAATTGTGGTGA 342 0.4503 MCCSVKTNASLVFSFANQAGLDMLETTLVALRDIMLDKVLDEAGRKILCSKFSKIMQQGVAYLPAGICVSSMNRPVSYEQAIAWKVLNDDDSNHRHALFLPCRFIGCWCLQLW* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02603 113 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 98 IPR044830 GO:0003700
Rops3g02603 113 Pfam MEKHLA domain 2 99 IPR013978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02603 Rops-Chr3 54774892 54775233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02603 1 94 Homeobox Transcription Factor Family AT1G30490 77.660 2.81e-47 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02603 K09338 - qsu:112031480 176.792