Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02602 ATGTCTTCACACAGCAACCATGCAACTCATGCTCATGCTGTTTATGTGTGGAGGGTCTTCAAAACATCATGCTCTAGCTTCATGGAACTCCATCTTCACTCACATGGACACCACCCAAGTCTCCCATGGCAGCATGCATGGTTAGCAATCACGTGTGAGCTTGTTGAAGACTTATGCATGGTGGAGACTTTGTCACATTTGAACCATTTGCGGGACAACGTGGCTGCTATGGCTCGCCAGTATGTGCGTAGCGTTGTGGGGTCTATTCAGAGGGTTGCCATGGCTATCGCTCCTTCTAGGCTCAGCACTCAGATGGGGCCAAAGTCGCTTCCCGGTTCACCAGAGGCTCTTACATTGGCACGATGGACCTGTAGAAGCTACAGGATGCACGCTGGTGTTGAGTTTTTTTTAGAGTTGAGTCCACAGCTGGGGATGCAATCTTGA 444 0.5 MSSHSNHATHAHAVYVWRVFKTSCSSFMELHLHSHGHHPSLPWQHAWLAITCELVEDLCMVETLSHLNHLRDNVAAMARQYVRSVVGSIQRVAMAIAPSRLSTQMGPKSLPGSPEALTLARWTCRSYRMHAGVEFFLELSPQLGMQS* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02602 147 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 68 136 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02602 Rops-Chr3 54774324 54774862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02602 52 136 Homeobox Transcription Factor Family AT2G34710 55.294 4.54e-24 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02602 K09338 - nnu:104590505 126.716