Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02601 ATGGCCACCGCCGGCACTGCCACCACGTCATACTTCTTCGGCATCCATCTCAGCAAGACCTCAAATTCTGGAAGATTCCACGCCCTCTTTAACCTCCGCACCAAAAAAACACCTCAGCCGAAGAAAAAAGAGGTGAAAGTGAAACCCGATGGTGAACGCCTCGTGTGGTTCCTAGGGGCTCAGCCACCGGAATGGCTCGACGGAACCATGATCGGTGACCATGGGTTCGACCCATTTGGGTTCGCGAAACTCAAAGACCTGAAGTTGGATGTGTGGGTTTGA 282 0.5319 MATAGTATTSYFFGIHLSKTSNSGRFHALFNLRTKKTPQPKKKEVKVKPDGERLVWFLGAQPPEWLDGTMIGDHGFDPFGFAKLKDLKLDVWV* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02601 93 Gene3D Chlorophyll a/b binding protein domain 54 92 - -
Rops3g02601 93 SUPERFAMILY Chlorophyll a-b binding protein 49 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02601 Rops-Chr3 54745366 54745647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02601 1 83 Chloroplast and Mitochondria Gene Families AT2G40100 52.326 4.23e-16 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02601 K08915 - gmx:100820335 105.916