Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02585 ATGAATCTCGATTCCGGAGAGCTTCTAGCCGTTAAACAAGTTGTGATTGCAGCAAGTAGTGCATCGAAGGTGAAGACACAGGCTCACATAAAGGAGCTTGAGGAAGAAGTTAAACTTAAAGATCTTTCACATCCCAACATTGTTAGATATTTGGGTACGGTTGTTGAAAAGGACACCTTAAATATTCTCCTGGAGTTTGTTCCTGGTGGATCCATATCATCATTATTGGGGAAGTTTGGAGCTTTCCCTGAGGCTGTCGTAAGGACTTACACGAAGCAGTTACTGCTTGGACTTGAGTACTTGCACAAAAATGGAATCATGCACAGAGATATTAAGGGAGCCAATATTCTTGTAGATAATAAAGGGTACATAAAACTTGCAGATTTTGGGGCATCCAAACGGGTCGTTGAGCTGGCTACCATTTCCGGTGCCAAGTCTAGGAAGGGTACTCCATATTGGATGGCTCCTGAAGTTATTCTCCAGACTGGGCATAGCTTCTCTGCTGACATATGA 513 0.4308 MNLDSGELLAVKQVVIAASSASKVKTQAHIKELEEEVKLKDLSHPNIVRYLGTVVEKDTLNILLEFVPGGSISSLLGKFGAFPEAVVRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGYIKLADFGASKRVVELATISGAKSRKGTPYWMAPEVILQTGHSFSADI* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02585 170 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 170 - -
Rops3g02585 170 ProSiteProfiles Protein kinase domain profile. 1 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02585 170 SMART serkin_6 1 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02585 170 CDD STKc_MAPKKK 1 170 - -
Rops3g02585 170 SUPERFAMILY Protein kinase-like (PK-like) 3 170 IPR011009 -
Rops3g02585 170 ProSitePatterns Serine/Threonine protein kinases active-site signature. 106 118 IPR008271 GO:0004672|GO:0006468
Rops3g02585 170 Gene3D Transferase(Phosphotransferase) domain 1 1 170 - -
Rops3g02585 170 Pfam Protein kinase domain 3 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02585 Rops-Chr3 54310175 54310687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02585 1 170 MAP Kinase Kinase Kinase AT1G09000 87.135 3.05e-101 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Rops3g02585 Pkinase 5.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02585 K20606 - gmx:100779001 296.975